BLASTX nr result

ID: Glycyrrhiza24_contig00032504 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032504
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549091.1| PREDICTED: pentatricopeptide repeat-containi...    89   4e-16
emb|CBI21323.3| unnamed protein product [Vitis vinifera]               64   1e-08
ref|XP_002274670.1| PREDICTED: pentatricopeptide repeat-containi...    64   1e-08
ref|XP_002336062.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
ref|XP_002298642.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08

>ref|XP_003549091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g14080-like [Glycine max]
          Length = 647

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 48/97 (49%), Positives = 60/97 (61%)
 Frame = +2

Query: 2   FFNWASQQPGFAHTPTTFXXXXXXXXXXXXXXXXXXXXFKRAQSLNFPIHPSVFRSVITS 181
           FFNWASQQPGF+HTP TF                     K+A++LNFPI PS+F S+I S
Sbjct: 65  FFNWASQQPGFSHTPFTFHSLLKSLSHTNHFSAIHSL-LKQAKALNFPIQPSLFSSIIAS 123

Query: 182 HLSRNNPNQAFSLFNDVVSILPQIGGPTCNSPIAALA 292
           H++RN   QAFSL+  V S+  +IG  T NS +AALA
Sbjct: 124 HVARNRARQAFSLYCGVGSLSAEIGVATSNSLLAALA 160


>emb|CBI21323.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 36/97 (37%), Positives = 50/97 (51%)
 Frame = +2

Query: 2   FFNWASQQPGFAHTPTTFXXXXXXXXXXXXXXXXXXXXFKRAQSLNFPIHPSVFRSVITS 181
           FF WASQ+PGFAHT  ++                     K  ++    +  SV+RSVI S
Sbjct: 69  FFYWASQKPGFAHTSISYQSVLKSLSISRQFNAVERL-LKDVKAQKIVLDSSVYRSVIAS 127

Query: 182 HLSRNNPNQAFSLFNDVVSILPQIGGPTCNSPIAALA 292
           H+       AF +FN+V ++  +IG  TCNS +AALA
Sbjct: 128 HIIGKRTQNAFLIFNEVSALSREIGPDTCNSLVAALA 164


>ref|XP_002274670.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14080
           [Vitis vinifera]
          Length = 660

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 36/97 (37%), Positives = 50/97 (51%)
 Frame = +2

Query: 2   FFNWASQQPGFAHTPTTFXXXXXXXXXXXXXXXXXXXXFKRAQSLNFPIHPSVFRSVITS 181
           FF WASQ+PGFAHT  ++                     K  ++    +  SV+RSVI S
Sbjct: 69  FFYWASQKPGFAHTSISYQSVLKSLSISRQFNAVERL-LKDVKAQKIVLDSSVYRSVIAS 127

Query: 182 HLSRNNPNQAFSLFNDVVSILPQIGGPTCNSPIAALA 292
           H+       AF +FN+V ++  +IG  TCNS +AALA
Sbjct: 128 HIIGKRTQNAFLIFNEVSALSREIGPDTCNSLVAALA 164


>ref|XP_002336062.1| predicted protein [Populus trichocarpa] gi|222869847|gb|EEF06978.1|
           predicted protein [Populus trichocarpa]
          Length = 626

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 34/96 (35%), Positives = 48/96 (50%)
 Frame = +2

Query: 2   FFNWASQQPGFAHTPTTFXXXXXXXXXXXXXXXXXXXXFKRAQSLNFPIHPSVFRSVITS 181
           FFNWASQQPGF H   T+                     KRA++ N  +  S++R V+ S
Sbjct: 69  FFNWASQQPGFTHNSLTYHSVLKSLSFSRQFNAIESL-LKRAKAQNLTLDSSIYRFVVDS 127

Query: 182 HLSRNNPNQAFSLFNDVVSILPQIGGPTCNSPIAAL 289
            + R     AFS+FN++ S    +G  T NS +A+L
Sbjct: 128 LIKRGKTQMAFSVFNEIKSQSLDLGTETSNSLLASL 163


>ref|XP_002298642.1| predicted protein [Populus trichocarpa] gi|222845900|gb|EEE83447.1|
           predicted protein [Populus trichocarpa]
          Length = 567

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 34/96 (35%), Positives = 48/96 (50%)
 Frame = +2

Query: 2   FFNWASQQPGFAHTPTTFXXXXXXXXXXXXXXXXXXXXFKRAQSLNFPIHPSVFRSVITS 181
           FFNWASQQPGF H   T+                     KRA++ N  +  S++R V+ S
Sbjct: 69  FFNWASQQPGFTHNSLTYHSVLKSLSFSRQFNAIESL-LKRAKAQNLTLDSSIYRFVVDS 127

Query: 182 HLSRNNPNQAFSLFNDVVSILPQIGGPTCNSPIAAL 289
            + R     AFS+FN++ S    +G  T NS +A+L
Sbjct: 128 LIKRGKTQMAFSVFNEIKSQSLDLGTETSNSLLASL 163


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