BLASTX nr result
ID: Glycyrrhiza24_contig00032504
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00032504 (292 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003549091.1| PREDICTED: pentatricopeptide repeat-containi... 89 4e-16 emb|CBI21323.3| unnamed protein product [Vitis vinifera] 64 1e-08 ref|XP_002274670.1| PREDICTED: pentatricopeptide repeat-containi... 64 1e-08 ref|XP_002336062.1| predicted protein [Populus trichocarpa] gi|2... 61 8e-08 ref|XP_002298642.1| predicted protein [Populus trichocarpa] gi|2... 61 8e-08 >ref|XP_003549091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14080-like [Glycine max] Length = 647 Score = 89.0 bits (219), Expect = 4e-16 Identities = 48/97 (49%), Positives = 60/97 (61%) Frame = +2 Query: 2 FFNWASQQPGFAHTPTTFXXXXXXXXXXXXXXXXXXXXFKRAQSLNFPIHPSVFRSVITS 181 FFNWASQQPGF+HTP TF K+A++LNFPI PS+F S+I S Sbjct: 65 FFNWASQQPGFSHTPFTFHSLLKSLSHTNHFSAIHSL-LKQAKALNFPIQPSLFSSIIAS 123 Query: 182 HLSRNNPNQAFSLFNDVVSILPQIGGPTCNSPIAALA 292 H++RN QAFSL+ V S+ +IG T NS +AALA Sbjct: 124 HVARNRARQAFSLYCGVGSLSAEIGVATSNSLLAALA 160 >emb|CBI21323.3| unnamed protein product [Vitis vinifera] Length = 676 Score = 63.9 bits (154), Expect = 1e-08 Identities = 36/97 (37%), Positives = 50/97 (51%) Frame = +2 Query: 2 FFNWASQQPGFAHTPTTFXXXXXXXXXXXXXXXXXXXXFKRAQSLNFPIHPSVFRSVITS 181 FF WASQ+PGFAHT ++ K ++ + SV+RSVI S Sbjct: 69 FFYWASQKPGFAHTSISYQSVLKSLSISRQFNAVERL-LKDVKAQKIVLDSSVYRSVIAS 127 Query: 182 HLSRNNPNQAFSLFNDVVSILPQIGGPTCNSPIAALA 292 H+ AF +FN+V ++ +IG TCNS +AALA Sbjct: 128 HIIGKRTQNAFLIFNEVSALSREIGPDTCNSLVAALA 164 >ref|XP_002274670.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14080 [Vitis vinifera] Length = 660 Score = 63.9 bits (154), Expect = 1e-08 Identities = 36/97 (37%), Positives = 50/97 (51%) Frame = +2 Query: 2 FFNWASQQPGFAHTPTTFXXXXXXXXXXXXXXXXXXXXFKRAQSLNFPIHPSVFRSVITS 181 FF WASQ+PGFAHT ++ K ++ + SV+RSVI S Sbjct: 69 FFYWASQKPGFAHTSISYQSVLKSLSISRQFNAVERL-LKDVKAQKIVLDSSVYRSVIAS 127 Query: 182 HLSRNNPNQAFSLFNDVVSILPQIGGPTCNSPIAALA 292 H+ AF +FN+V ++ +IG TCNS +AALA Sbjct: 128 HIIGKRTQNAFLIFNEVSALSREIGPDTCNSLVAALA 164 >ref|XP_002336062.1| predicted protein [Populus trichocarpa] gi|222869847|gb|EEF06978.1| predicted protein [Populus trichocarpa] Length = 626 Score = 61.2 bits (147), Expect = 8e-08 Identities = 34/96 (35%), Positives = 48/96 (50%) Frame = +2 Query: 2 FFNWASQQPGFAHTPTTFXXXXXXXXXXXXXXXXXXXXFKRAQSLNFPIHPSVFRSVITS 181 FFNWASQQPGF H T+ KRA++ N + S++R V+ S Sbjct: 69 FFNWASQQPGFTHNSLTYHSVLKSLSFSRQFNAIESL-LKRAKAQNLTLDSSIYRFVVDS 127 Query: 182 HLSRNNPNQAFSLFNDVVSILPQIGGPTCNSPIAAL 289 + R AFS+FN++ S +G T NS +A+L Sbjct: 128 LIKRGKTQMAFSVFNEIKSQSLDLGTETSNSLLASL 163 >ref|XP_002298642.1| predicted protein [Populus trichocarpa] gi|222845900|gb|EEE83447.1| predicted protein [Populus trichocarpa] Length = 567 Score = 61.2 bits (147), Expect = 8e-08 Identities = 34/96 (35%), Positives = 48/96 (50%) Frame = +2 Query: 2 FFNWASQQPGFAHTPTTFXXXXXXXXXXXXXXXXXXXXFKRAQSLNFPIHPSVFRSVITS 181 FFNWASQQPGF H T+ KRA++ N + S++R V+ S Sbjct: 69 FFNWASQQPGFTHNSLTYHSVLKSLSFSRQFNAIESL-LKRAKAQNLTLDSSIYRFVVDS 127 Query: 182 HLSRNNPNQAFSLFNDVVSILPQIGGPTCNSPIAAL 289 + R AFS+FN++ S +G T NS +A+L Sbjct: 128 LIKRGKTQMAFSVFNEIKSQSLDLGTETSNSLLASL 163