BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032494
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AER13153.1| putative gag polyprotein [Phaseolus vulgaris]          138   5e-31
gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]               121   5e-26
gb|AAD20433.1| putative retroelement pol polyprotein [Arabidopsi...   119   3e-25
gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]             107   1e-21
gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]             102   3e-20

>gb|AER13153.1| putative gag polyprotein [Phaseolus vulgaris]
          Length = 1153

 Score =  138 bits (347), Expect = 5e-31
 Identities = 71/109 (65%), Positives = 84/109 (77%)
 Frame = +2

Query: 2    LEGPDGVLIEQSLRFEFKASNNQAEYEALIAGMRLAKEMGATELQARSDSQLVTGQVSGE 181
            LEGPDG+L+EQ L+F FKASNNQAEYEAL+AGMRLAK+M    L  RSDSQLVT QV+G 
Sbjct: 787  LEGPDGILVEQPLQFAFKASNNQAEYEALLAGMRLAKDMSVKNLVVRSDSQLVTEQVAGN 846

Query: 182  YQAKDPQLARYLQRVQSLISGFKEFRLTHVPREHNARADLLSKLASTKK 328
            +QAKD  LA    +V  +   FKE+ L +VPR+HN +ADLLSKL STKK
Sbjct: 847  FQAKDSHLA----KVHMVAKVFKEYELVYVPRDHNVKADLLSKLESTKK 891


>gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1859

 Score =  121 bits (304), Expect = 5e-26
 Identities = 57/109 (52%), Positives = 82/109 (75%)
 Frame = +2

Query: 2    LEGPDGVLIEQSLRFEFKASNNQAEYEALIAGMRLAKEMGATELQARSDSQLVTGQVSGE 181
            LEGP  +++EQ+++FEFK SNNQAEYEA+IAG+ LA E+  T +  +SDS+LV GQ++GE
Sbjct: 1347 LEGPGEIVVEQAMKFEFKTSNNQAEYEAIIAGLHLAIELEVTNITCKSDSRLVVGQLTGE 1406

Query: 182  YQAKDPQLARYLQRVQSLISGFKEFRLTHVPREHNARADLLSKLASTKK 328
            Y+ ++  L +Y   V++L++ FKE    HV RE+N RAD LS+LA+ KK
Sbjct: 1407 YEVRETLLQQYFHFVKNLLNRFKEISFQHVRRENNTRADALSRLATLKK 1455


>gb|AAD20433.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 889

 Score =  119 bits (298), Expect = 3e-25
 Identities = 60/110 (54%), Positives = 78/110 (70%)
 Frame = +2

Query: 2   LEGPDGVLIEQSLRFEFKASNNQAEYEALIAGMRLAKEMGATELQARSDSQLVTGQVSGE 181
           L  P G +IEQSL+  F ASNN++EYEALIAG++LA+E G  E+ A SDSQLVT Q  GE
Sbjct: 662 LTSPTGEVIEQSLQLGFNASNNESEYEALIAGIKLAQEKGIREIHAYSDSQLVTSQFHGE 721

Query: 182 YQAKDPQLARYLQRVQSLISGFKEFRLTHVPREHNARADLLSKLASTKKP 331
           Y+AKD ++  YL+ V++L   F+ F+LT +PR  N  AD L+ LAST  P
Sbjct: 722 YEAKDERMEAYLELVKTLAQQFESFKLTRIPRGENTSADTLAALASTSDP 771


>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  107 bits (266), Expect = 1e-21
 Identities = 55/110 (50%), Positives = 72/110 (65%)
 Frame = +2

Query: 2   LEGPDGVLIEQSLRFEFKASNNQAEYEALIAGMRLAKEMGATELQARSDSQLVTGQVSGE 181
           LE P   ++EQS R  F ASNN+AEYEALIAG+RLA+ +GA E+ A  DSQLV  Q +G+
Sbjct: 470 LESPTSEILEQSFRLLFDASNNEAEYEALIAGLRLAQGVGAKEILAYCDSQLVVNQFNGD 529

Query: 182 YQAKDPQLARYLQRVQSLISGFKEFRLTHVPREHNARADLLSKLASTKKP 331
           Y+AKD ++  YL+  + L   F +F L  + R  N  AD L+ LAST  P
Sbjct: 530 YEAKDSRMEAYLEVAKDLSKNFSKFELIRILRGENTTADALAALASTSDP 579


>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score =  102 bits (254), Expect = 3e-20
 Identities = 53/107 (49%), Positives = 72/107 (67%)
 Frame = +2

Query: 2    LEGPDGVLIEQSLRFEFKASNNQAEYEALIAGMRLAKEMGATELQARSDSQLVTGQVSGE 181
            L  P   ++EQS R  F A+NN AEYE LIAG+RLA  M  T + A +DSQL+ GQ+SGE
Sbjct: 1276 LVSPTAEVLEQSFRLRFVATNNVAEYEVLIAGLRLAAGMQITTIHAFTDSQLIAGQLSGE 1335

Query: 182  YQAKDPQLARYLQRVQSLISGFKEFRLTHVPREHNARADLLSKLAST 322
            Y+AK+ ++  YL+ VQ +   F+ F+L+ +PR  NA AD L+ LA T
Sbjct: 1336 YEAKNEKMDAYLKIVQLMTKDFENFKLSKIPRGDNAPADALAALALT 1382