BLASTX nr result

ID: Glycyrrhiza24_contig00032486 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032486
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003589826.1| Pentatricopeptide repeat-containing protein ...    85   7e-15
ref|XP_003556973.1| PREDICTED: pentatricopeptide repeat-containi...    62   6e-08

>ref|XP_003589826.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355478874|gb|AES60077.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 526

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 41/51 (80%), Positives = 44/51 (86%)
 Frame = +3

Query: 3   DTGVAKVPAVSFIEVNNRVYEFIAGDKSNIYFVGIFDVLHSLDGQLKIEDH 155
           D GV KVP VSFIEVNN VYEFIAGDK +IYFV I+DVLHSLDGQ+KIE H
Sbjct: 476 DAGVEKVPGVSFIEVNNIVYEFIAGDKLSIYFVDIYDVLHSLDGQIKIEIH 526


>ref|XP_003556973.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Glycine max]
          Length = 549

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 34/50 (68%), Positives = 39/50 (78%)
 Frame = +3

Query: 3   DTGVAKVPAVSFIEVNNRVYEFIAGDKSNIYFVGIFDVLHSLDGQLKIED 152
           DT   KVP VSF+E+NNRVYEFIAGDK NI F+   DVL S++GQL IED
Sbjct: 494 DTCAEKVPGVSFVELNNRVYEFIAGDKLNICFL---DVLQSINGQL-IED 539


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