BLASTX nr result

ID: Glycyrrhiza24_contig00032483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032483
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608858.1| WD repeat-containing protein [Medicago trunc...   147   7e-34
ref|XP_002279752.2| PREDICTED: WD repeat-containing protein 18-l...   123   1e-26
emb|CBI15639.3| unnamed protein product [Vitis vinifera]              123   1e-26
emb|CAN81788.1| hypothetical protein VITISV_026009 [Vitis vinifera]   123   1e-26
ref|XP_002511209.1| WD-repeat protein, putative [Ricinus communi...   119   3e-25

>ref|XP_003608858.1| WD repeat-containing protein [Medicago truncatula]
           gi|355509913|gb|AES91055.1| WD repeat-containing protein
           [Medicago truncatula]
          Length = 499

 Score =  147 bits (372), Expect = 7e-34
 Identities = 67/83 (80%), Positives = 76/83 (91%)
 Frame = +3

Query: 171 MVEEGEAVVVCSDKSMKIGVTIWDIDKGEKLLHIPTCASSPFGLLCLRNRFLVASQINKH 350
           +VEEGEA+V CSDKSM+IGVTIWD++ GEK+LHIPTCAS P G+LCLRNRFLVASQ+NKH
Sbjct: 30  VVEEGEALVACSDKSMRIGVTIWDMETGEKMLHIPTCASPPLGMLCLRNRFLVASQLNKH 89

Query: 351 GSVGQGSIVVWALNKPQHPLLNY 419
           GSVG G+IVVW LNKPQ PLLNY
Sbjct: 90  GSVGGGAIVVWPLNKPQQPLLNY 112


>ref|XP_002279752.2| PREDICTED: WD repeat-containing protein 18-like [Vitis vinifera]
          Length = 476

 Score =  123 bits (309), Expect = 1e-26
 Identities = 53/78 (67%), Positives = 68/78 (87%)
 Frame = +3

Query: 186 EAVVVCSDKSMKIGVTIWDIDKGEKLLHIPTCASSPFGLLCLRNRFLVASQINKHGSVGQ 365
           EA+VVCSD+SM +G+T+WD+  G++LLHIPTCA+SP GLLCLR +FLVASQI++HGS+G 
Sbjct: 8   EALVVCSDRSMSVGITVWDMVSGDQLLHIPTCAASPHGLLCLREQFLVASQIHRHGSLGG 67

Query: 366 GSIVVWALNKPQHPLLNY 419
           G+I +W LNKPQ PL NY
Sbjct: 68  GAIFIWPLNKPQSPLRNY 85


>emb|CBI15639.3| unnamed protein product [Vitis vinifera]
          Length = 281

 Score =  123 bits (309), Expect = 1e-26
 Identities = 53/78 (67%), Positives = 68/78 (87%)
 Frame = +3

Query: 186 EAVVVCSDKSMKIGVTIWDIDKGEKLLHIPTCASSPFGLLCLRNRFLVASQINKHGSVGQ 365
           EA+VVCSD+SM +G+T+WD+  G++LLHIPTCA+SP GLLCLR +FLVASQI++HGS+G 
Sbjct: 8   EALVVCSDRSMSVGITVWDMVSGDQLLHIPTCAASPHGLLCLREQFLVASQIHRHGSLGG 67

Query: 366 GSIVVWALNKPQHPLLNY 419
           G+I +W LNKPQ PL NY
Sbjct: 68  GAIFIWPLNKPQSPLRNY 85


>emb|CAN81788.1| hypothetical protein VITISV_026009 [Vitis vinifera]
          Length = 503

 Score =  123 bits (309), Expect = 1e-26
 Identities = 53/78 (67%), Positives = 68/78 (87%)
 Frame = +3

Query: 186 EAVVVCSDKSMKIGVTIWDIDKGEKLLHIPTCASSPFGLLCLRNRFLVASQINKHGSVGQ 365
           EA+VVCSD+SM +G+T+WD+  G++LLHIPTCA+SP GLLCLR +FLVASQI++HGS+G 
Sbjct: 8   EALVVCSDRSMSVGITVWDMVSGDQLLHIPTCAASPHGLLCLREQFLVASQIHRHGSLGG 67

Query: 366 GSIVVWALNKPQHPLLNY 419
           G+I +W LNKPQ PL NY
Sbjct: 68  GAIFIWPLNKPQSPLRNY 85


>ref|XP_002511209.1| WD-repeat protein, putative [Ricinus communis]
           gi|223550324|gb|EEF51811.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 471

 Score =  119 bits (298), Expect = 3e-25
 Identities = 51/78 (65%), Positives = 67/78 (85%)
 Frame = +3

Query: 186 EAVVVCSDKSMKIGVTIWDIDKGEKLLHIPTCASSPFGLLCLRNRFLVASQINKHGSVGQ 365
           EA+V CSD+SM  G++IWD++ G++L+HIPTCAS+P GLLCL+++FLVASQ+NKHGSVG 
Sbjct: 6   EALVGCSDRSMGTGISIWDVETGDRLMHIPTCASAPHGLLCLKDQFLVASQVNKHGSVGG 65

Query: 366 GSIVVWALNKPQHPLLNY 419
           G+I  W LNKPQ PL +Y
Sbjct: 66  GAIFTWPLNKPQSPLRSY 83


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