BLASTX nr result

ID: Glycyrrhiza24_contig00032481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032481
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30363.3| unnamed protein product [Vitis vinifera]              154   7e-36
emb|CAN79169.1| hypothetical protein VITISV_012165 [Vitis vinifera]   153   1e-35
ref|XP_002530164.1| Splicing factor, arginine/serine-rich, putat...   130   1e-28
ref|XP_002308446.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25
ref|XP_003572587.1| PREDICTED: uncharacterized protein LOC100843...   115   4e-24

>emb|CBI30363.3| unnamed protein product [Vitis vinifera]
          Length = 651

 Score =  154 bits (389), Expect = 7e-36
 Identities = 75/133 (56%), Positives = 97/133 (72%)
 Frame = +3

Query: 3   ILSPRIVKEAEGFQHSGALMMDNIPTEIQKPVSETNVNPHAGLSTLMSTEEMCMVLNNHG 182
           ILSP  ++E    Q+SGA MM+++    +KP SE      AG ST +S+EE+  +L  +G
Sbjct: 505 ILSPESLRETAELQNSGAWMMEHLLAPTKKPDSEAMAGSFAGNSTCISSEEVFKILKYYG 564

Query: 183 LELPKDYERNSTMDSFFGAARLWPWHIIYYRRLKKGPISTENYARRVAQNQEFGIVDKYI 362
           LE  +D + +  ++ +FG+ARLWPW IIYYRRLKKGPISTENY RR+AQN+EFGIVDKYI
Sbjct: 565 LEHSEDNKMHLPVEDYFGSARLWPWEIIYYRRLKKGPISTENYDRRIAQNREFGIVDKYI 624

Query: 363 RSSSGWGEFSLEN 401
           RSSSGWGE   +N
Sbjct: 625 RSSSGWGELVQDN 637


>emb|CAN79169.1| hypothetical protein VITISV_012165 [Vitis vinifera]
          Length = 685

 Score =  153 bits (387), Expect = 1e-35
 Identities = 75/133 (56%), Positives = 96/133 (72%)
 Frame = +3

Query: 3   ILSPRIVKEAEGFQHSGALMMDNIPTEIQKPVSETNVNPHAGLSTLMSTEEMCMVLNNHG 182
           ILSP  ++E    Q SGA MM+++    +KP SE      AG ST +S+EE+  +L  +G
Sbjct: 552 ILSPESLRETAELQKSGAWMMEHLLAPTKKPDSEAMAGSFAGNSTCISSEEVFKILKYYG 611

Query: 183 LELPKDYERNSTMDSFFGAARLWPWHIIYYRRLKKGPISTENYARRVAQNQEFGIVDKYI 362
           LE  +D + +  ++ +FG+ARLWPW IIYYRRLKKGPISTENY RR+AQN+EFGIVDKYI
Sbjct: 612 LEHSEDNKMHLPVEDYFGSARLWPWEIIYYRRLKKGPISTENYDRRIAQNREFGIVDKYI 671

Query: 363 RSSSGWGEFSLEN 401
           RSSSGWGE   +N
Sbjct: 672 RSSSGWGELVQDN 684


>ref|XP_002530164.1| Splicing factor, arginine/serine-rich, putative [Ricinus communis]
           gi|223530325|gb|EEF32219.1| Splicing factor,
           arginine/serine-rich, putative [Ricinus communis]
          Length = 676

 Score =  130 bits (327), Expect = 1e-28
 Identities = 62/121 (51%), Positives = 89/121 (73%), Gaps = 1/121 (0%)
 Frame = +3

Query: 42  QHSGALMMDNIPTEIQKPVSETNVNPHAGLSTLMSTEEMCMVLNNH-GLELPKDYERNST 218
           Q S  L  +  P +++ P S+ +++  +G S  +S+EE+ +V+ ++ G +L  + +R+  
Sbjct: 556 QDSDKLTTELAPVQMKNPDSDPSISLRSGHSLSISSEELHLVIKHYYGHDLQNENQRHLP 615

Query: 219 MDSFFGAARLWPWHIIYYRRLKKGPISTENYARRVAQNQEFGIVDKYIRSSSGWGEFSLE 398
            D++FG+ARLWPW IIYYRRLKKGPIS ENYARR+ QN+EFG+VDKYIRSSSGW E + E
Sbjct: 616 ADAYFGSARLWPWEIIYYRRLKKGPISVENYARRLDQNREFGVVDKYIRSSSGWEELTQE 675

Query: 399 N 401
           N
Sbjct: 676 N 676


>ref|XP_002308446.1| predicted protein [Populus trichocarpa] gi|222854422|gb|EEE91969.1|
           predicted protein [Populus trichocarpa]
          Length = 693

 Score =  118 bits (295), Expect = 6e-25
 Identities = 59/120 (49%), Positives = 80/120 (66%)
 Frame = +3

Query: 42  QHSGALMMDNIPTEIQKPVSETNVNPHAGLSTLMSTEEMCMVLNNHGLELPKDYERNSTM 221
           Q+S     +++   ++K   +   +  +  ST +S  E+  VL ++GL    + E+    
Sbjct: 573 QNSDTFETEHVQVPLKKLDPQAPASSSSFHSTSISAGELSSVLKHYGLGCQDENEKPLPA 632

Query: 222 DSFFGAARLWPWHIIYYRRLKKGPISTENYARRVAQNQEFGIVDKYIRSSSGWGEFSLEN 401
           +++FG+ARLWPW II+YRRLKKG IS ENYARRV QN+EFGIVDKYIRSSSGWGE   EN
Sbjct: 633 EAYFGSARLWPWEIIHYRRLKKGLISIENYARRVDQNREFGIVDKYIRSSSGWGELHQEN 692


>ref|XP_003572587.1| PREDICTED: uncharacterized protein LOC100843176 [Brachypodium
           distachyon]
          Length = 628

 Score =  115 bits (288), Expect = 4e-24
 Identities = 54/103 (52%), Positives = 71/103 (68%)
 Frame = +3

Query: 78  TEIQKPVSETNVNPHAGLSTLMSTEEMCMVLNNHGLELPKDYERNSTMDSFFGAARLWPW 257
           + ++KP  E        +S  ++  E+   L ++G+E  +    N  ++ FFGAARLWPW
Sbjct: 524 SSVKKPNKENLAKSGRDISLKLTMNEVVSALKHYGMEAREIGLLNQPVEKFFGAARLWPW 583

Query: 258 HIIYYRRLKKGPISTENYARRVAQNQEFGIVDKYIRSSSGWGE 386
            IIYYRR KKGPISTENYA+RV QN+EFGIVD+Y+RSSSGW E
Sbjct: 584 EIIYYRRRKKGPISTENYAKRVEQNKEFGIVDQYVRSSSGWWE 626


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