BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032470
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containi...   121   5e-26
ref|XP_003610900.1| Pentatricopeptide repeat-containing protein ...   118   6e-25
ref|XP_002309826.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|NP_188439.2| pentatricopeptide repeat-containing protein [Ar...    72   4e-11
gb|AAW62966.1| chloroplast embryo-defective 1270 [Arabidopsis th...    72   4e-11

>ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like [Glycine max]
          Length = 1476

 Score =  121 bits (304), Expect = 5e-26
 Identities = 67/93 (72%), Positives = 70/93 (75%)
 Frame = +2

Query: 2   LKVAIRNGYKLDHEIFLXXXXXXXXXXXXXEACELLGFLREHAPEDIQMITEALITIHCK 181
           LKVAI NGY+LDHEIFL             EACELL F REHAP DIQMITEALI I CK
Sbjct: 620 LKVAISNGYELDHEIFLSIMSSYSSSARYSEACELLEFSREHAPNDIQMITEALIIILCK 679

Query: 182 AEKLDAALEEYRNKGGGLGSFRSGTMYESLIQE 280
           A+KLDAALEEYR+K G LG FRS TMYESLIQE
Sbjct: 680 AKKLDAALEEYRSK-GELGQFRSCTMYESLIQE 711


>ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355512235|gb|AES93858.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1508

 Score =  118 bits (295), Expect = 6e-25
 Identities = 64/93 (68%), Positives = 70/93 (75%)
 Frame = +2

Query: 2   LKVAIRNGYKLDHEIFLXXXXXXXXXXXXXEACELLGFLREHAPEDIQMITEALITIHCK 181
           LKVAI NGY+LD EIFL             EACEL+ F REHAP+DIQMITEALI I CK
Sbjct: 635 LKVAISNGYELDREIFLSIMSSYSSSARYSEACELVEFFREHAPDDIQMITEALIIILCK 694

Query: 182 AEKLDAALEEYRNKGGGLGSFRSGTMYESLIQE 280
           A KLDAALEEYR++ GGLG+FRS TMYESLI E
Sbjct: 695 AGKLDAALEEYRSR-GGLGTFRSCTMYESLIHE 726


>ref|XP_002309826.1| predicted protein [Populus trichocarpa] gi|222852729|gb|EEE90276.1|
           predicted protein [Populus trichocarpa]
          Length = 1480

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 43/92 (46%), Positives = 57/92 (61%)
 Frame = +2

Query: 2   LKVAIRNGYKLDHEIFLXXXXXXXXXXXXXEACELLGFLREHAPEDIQMITEALITIHCK 181
           L+ AI + +++D E  L             EA +LL FL+EH+P   QMITEAL+ + CK
Sbjct: 625 LRRAISDHFEIDRENLLSILSSYSSSGRHAEALDLLEFLKEHSPRSSQMITEALVVMLCK 684

Query: 182 AEKLDAALEEYRNKGGGLGSFRSGTMYESLIQ 277
           A++LDAAL+EY N    LG   S TM+ESLIQ
Sbjct: 685 AQQLDAALKEYSN-NRELGFTGSFTMFESLIQ 715


>ref|NP_188439.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|322510063|sp|Q5G1S8.2|PP241_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g18110, chloroplastic; AltName: Full=Protein EMBRYO
           DEFECTIVE 1270; Flags: Precursor
           gi|9294066|dbj|BAB02023.1| unnamed protein product
           [Arabidopsis thaliana] gi|332642528|gb|AEE76049.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 1440

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 43/92 (46%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
 Frame = +2

Query: 2   LKVAIRNGYKLDHEIFLXXXXXXXXXXXXXEACELLGFLREHAPEDIQMITEALITIHCK 181
           LKVAI NGY+L+++  L             EA ELL FL+EHA    ++ITEALI +HCK
Sbjct: 597 LKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCK 656

Query: 182 AEKLDAALEEYRNKGGGLG-SFRSGTMYESLI 274
              L AAL+EY       G  F S TMYE+L+
Sbjct: 657 VNNLSAALDEYFADPCVHGWCFGSSTMYETLL 688


>gb|AAW62966.1| chloroplast embryo-defective 1270 [Arabidopsis thaliana]
          Length = 1429

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 43/92 (46%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
 Frame = +2

Query: 2   LKVAIRNGYKLDHEIFLXXXXXXXXXXXXXEACELLGFLREHAPEDIQMITEALITIHCK 181
           LKVAI NGY+L+++  L             EA ELL FL+EHA    ++ITEALI +HCK
Sbjct: 597 LKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCK 656

Query: 182 AEKLDAALEEYRNKGGGLG-SFRSGTMYESLI 274
              L AAL+EY       G  F S TMYE+L+
Sbjct: 657 VNNLSAALDEYFADPCVHGWCFGSSTMYETLL 688