BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032462
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540386.1| PREDICTED: pentatricopeptide repeat-containi...   137   1e-30
ref|XP_002278909.1| PREDICTED: pentatricopeptide repeat-containi...   120   1e-25
ref|XP_002892331.1| pentatricopeptide repeat-containing protein ...   100   1e-19
ref|NP_563765.1| pentatricopeptide repeat-containing protein [Ar...   100   1e-19
ref|XP_004139374.1| PREDICTED: pentatricopeptide repeat-containi...    97   1e-18

>ref|XP_003540386.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g06270-like [Glycine max]
          Length = 342

 Score =  137 bits (344), Expect = 1e-30
 Identities = 64/69 (92%), Positives = 66/69 (95%)
 Frame = +3

Query: 48  HPLPLALAVLQRTLRSGCVPVPQTLVLLSSAWLDRRCLSHSVANILLEMQSIGYHPDCGT 227
           HP PLALAVLQRTLRSGCVPVPQT VLLSSAWLD+ CLSHSVANILL+MQSIGYHPDCGT
Sbjct: 113 HPFPLALAVLQRTLRSGCVPVPQTHVLLSSAWLDQHCLSHSVANILLQMQSIGYHPDCGT 172

Query: 228 CNYLLSSLC 254
           CNYLLSSLC
Sbjct: 173 CNYLLSSLC 181


>ref|XP_002278909.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06270
           [Vitis vinifera] gi|302143379|emb|CBI21940.3| unnamed
           protein product [Vitis vinifera]
          Length = 343

 Score =  120 bits (301), Expect = 1e-25
 Identities = 56/69 (81%), Positives = 63/69 (91%)
 Frame = +3

Query: 48  HPLPLALAVLQRTLRSGCVPVPQTLVLLSSAWLDRRCLSHSVANILLEMQSIGYHPDCGT 227
           +PLPLALA+LQRTLRSGC+PVPQT +LLSSAWL RR  SHSV+NIL EMQSIGY+PDCGT
Sbjct: 114 NPLPLALAILQRTLRSGCIPVPQTHLLLSSAWLSRRRQSHSVSNILSEMQSIGYYPDCGT 173

Query: 228 CNYLLSSLC 254
           CNYL+ SLC
Sbjct: 174 CNYLILSLC 182


>ref|XP_002892331.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297338173|gb|EFH68590.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 343

 Score =  100 bits (250), Expect = 1e-19
 Identities = 48/68 (70%), Positives = 57/68 (83%)
 Frame = +3

Query: 51  PLPLALAVLQRTLRSGCVPVPQTLVLLSSAWLDRRCLSHSVANILLEMQSIGYHPDCGTC 230
           PLPL+ A+LQRTLRSGC+P PQT +LLS AWL+RR  S SVA+I+ EM+ IGY PD GTC
Sbjct: 115 PLPLSFAILQRTLRSGCLPNPQTQLLLSDAWLERRRGSQSVADIINEMKLIGYSPDTGTC 174

Query: 231 NYLLSSLC 254
           NYL+SSLC
Sbjct: 175 NYLVSSLC 182


>ref|NP_563765.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75264068|sp|Q9LNC0.1|PPR16_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g06270 gi|8844132|gb|AAF80224.1|AC025290_13 Contains
           similarity to an unknown protein F23N19.4 gi|6630464
           from Arabidopsis thaliana gb|AC007190 and contains
           multiple PPR PF|01535 repeats. EST gb|T44174 comes from
           this gene [Arabidopsis thaliana]
           gi|17529194|gb|AAL38823.1| unknown protein [Arabidopsis
           thaliana] gi|20465473|gb|AAM20196.1| unknown protein
           [Arabidopsis thaliana] gi|21536601|gb|AAM60933.1|
           unknown [Arabidopsis thaliana]
           gi|332189849|gb|AEE27970.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 343

 Score =  100 bits (249), Expect = 1e-19
 Identities = 48/68 (70%), Positives = 57/68 (83%)
 Frame = +3

Query: 51  PLPLALAVLQRTLRSGCVPVPQTLVLLSSAWLDRRCLSHSVANILLEMQSIGYHPDCGTC 230
           PLPL+ A+LQRTLRSGC+P PQT +LLS AWL+RR  S SVA+I+ EM+ IGY PD GTC
Sbjct: 115 PLPLSFAILQRTLRSGCLPNPQTHLLLSDAWLERRRGSQSVADIINEMKLIGYSPDTGTC 174

Query: 231 NYLLSSLC 254
           NYL+SSLC
Sbjct: 175 NYLVSSLC 182


>ref|XP_004139374.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g06270-like [Cucumis sativus]
           gi|449483078|ref|XP_004156487.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g06270-like [Cucumis sativus]
          Length = 343

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 47/68 (69%), Positives = 53/68 (77%)
 Frame = +3

Query: 51  PLPLALAVLQRTLRSGCVPVPQTLVLLSSAWLDRRCLSHSVANILLEMQSIGYHPDCGTC 230
           P PL+L VLQR L SGCVP PQT  LLSSAWL +R  + SVANIL++MQSIGY PD   C
Sbjct: 115 PFPLSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNIC 174

Query: 231 NYLLSSLC 254
           NYL+SSLC
Sbjct: 175 NYLISSLC 182