BLASTX nr result

ID: Glycyrrhiza24_contig00032457 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032457
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588311.1| NADH-ubiquinone oxidoreductase chain [Medica...    77   3e-21
ref|XP_003588331.1| NADH-ubiquinone oxidoreductase chain [Medica...   104   8e-21
ref|XP_004149312.1| PREDICTED: (-)-germacrene D synthase-like [C...    90   2e-18
ref|YP_004927621.1| hypothetical protein AnruMp19 (mitochondrion...    89   4e-16
ref|XP_003588406.1| hypothetical protein MTR_1g006900 [Medicago ...    80   1e-13

>ref|XP_003588311.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|355477359|gb|AES58562.1| NADH-ubiquinone
           oxidoreductase chain [Medicago truncatula]
          Length = 548

 Score = 76.6 bits (187), Expect(2) = 3e-21
 Identities = 38/63 (60%), Positives = 43/63 (68%), Gaps = 12/63 (19%)
 Frame = +2

Query: 47  IVRGHNSP------------NTIIRGEQELGIGCGRNSRQWLRCSVDSLPLCGGPDPLRV 190
           I+R H++P             ++  G  ELGIGCGRNSRQWLRCSVDSLPLCGGPDPLRV
Sbjct: 356 ILRCHDAPIPMAIPLILLALGSLFVGYLELGIGCGRNSRQWLRCSVDSLPLCGGPDPLRV 415

Query: 191 SRK 199
             K
Sbjct: 416 INK 418



 Score = 50.1 bits (118), Expect(2) = 3e-21
 Identities = 20/23 (86%), Positives = 22/23 (95%)
 Frame = +1

Query: 235 LVNKCKLCCPTVWSTDHTEGQAL 303
           ++NKCKL CPTVWSTDHTEGQAL
Sbjct: 415 VINKCKLRCPTVWSTDHTEGQAL 437


>ref|XP_003588331.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|355477379|gb|AES58582.1| NADH-ubiquinone
           oxidoreductase chain [Medicago truncatula]
          Length = 569

 Score =  104 bits (259), Expect = 8e-21
 Identities = 57/96 (59%), Positives = 62/96 (64%), Gaps = 12/96 (12%)
 Frame = +2

Query: 47  IVRGHNSP------------NTIIRGEQELGIGCGRNSRQWLRCSVDSLPLCGGPDPLRV 190
           I+R H++P             ++  G  ELGIGCGRNSRQWLRCSVDSLPLCGGPDPLRV
Sbjct: 377 ILRCHDAPIPMAIPLILLALGSLFVGYLELGIGCGRNSRQWLRCSVDSLPLCGGPDPLRV 436

Query: 191 SRKGRRKEALANRHN*LTSVSFAARQYGVLTTPRDR 298
           SRKGRRKEAL                YGVLTTPRDR
Sbjct: 437 SRKGRRKEAL----------------YGVLTTPRDR 456


>ref|XP_004149312.1| PREDICTED: (-)-germacrene D synthase-like [Cucumis sativus]
          Length = 828

 Score = 89.7 bits (221), Expect(2) = 2e-18
 Identities = 42/57 (73%), Positives = 47/57 (82%)
 Frame = -1

Query: 305 FRACPSVWSVLHTVGQQSLHLLTNYDGSPGPLSSSLFCSLVRGPDPHKGGGSRLNIS 135
           FRACPSVWSVLHTVGQ+SLHL TNY+GSPGPLSSSLFCSLV    P +G  S  ++S
Sbjct: 378 FRACPSVWSVLHTVGQRSLHLFTNYEGSPGPLSSSLFCSLVGSGPPQRGRESTEHLS 434



 Score = 27.3 bits (59), Expect(2) = 2e-18
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = -2

Query: 82  DDRVG*IVTSYDRVG 38
           D R+G IVTSYDRVG
Sbjct: 453 DSRLGFIVTSYDRVG 467



 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 32/32 (100%), Positives = 32/32 (100%)
 Frame = -3

Query: 180 GSGPPQRGRESTEHLSHWREFRPHPIPNSCSP 85
           GSGPPQRGRESTEHLSHWREFRPHPIPNSCSP
Sbjct: 419 GSGPPQRGRESTEHLSHWREFRPHPIPNSCSP 450


>ref|YP_004927621.1| hypothetical protein AnruMp19 (mitochondrion) [Anomodon rugelii]
           gi|336089478|gb|AEH99668.1| hypothetical protein
           AnruMp19 [Anomodon rugelii]
          Length = 124

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 53/74 (71%), Positives = 56/74 (75%), Gaps = 2/74 (2%)
 Frame = -1

Query: 302 RACPSVWSVLHTVGQQSLHLLTNYDGSPGPLSSSLFCS-LVRG-PDPHKGGGSRLNISAI 129
           R  PSVWSVL TVGQQSLHL T Y GSP PLSSSLFCS   RG PD  +   SRLNISAI
Sbjct: 45  RIRPSVWSVLDTVGQQSLHLFT-YSGSPRPLSSSLFCSPSTRGLPDLLQREESRLNISAI 103

Query: 128 GGNFARIRSPILVH 87
           GGNFARI+  I+VH
Sbjct: 104 GGNFARIQFSIIVH 117


>ref|XP_003588406.1| hypothetical protein MTR_1g006900 [Medicago truncatula]
           gi|355477454|gb|AES58657.1| hypothetical protein
           MTR_1g006900 [Medicago truncatula]
          Length = 160

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 42/65 (64%), Positives = 42/65 (64%)
 Frame = +1

Query: 109 MRAKFPPMAEMFSRLPPPLWGSGPLTSEQKXXXXXXXXXXS*LVNKCKLCCPTVWSTDHT 288
           MRAKFPPMAEMFSRLPPPLWGSGPLTSEQK                       VWSTDHT
Sbjct: 1   MRAKFPPMAEMFSRLPPPLWGSGPLTSEQKREEERG----------------PVWSTDHT 44

Query: 289 EGQAL 303
           EGQAL
Sbjct: 45  EGQAL 49


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