BLASTX nr result

ID: Glycyrrhiza24_contig00032455 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032455
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607305.1| Chromodomain helicase DNA binding protein [M...   158   5e-37
ref|XP_003538947.1| PREDICTED: uncharacterized protein LOC100800...   153   1e-35
ref|XP_003540620.1| PREDICTED: uncharacterized protein LOC100791...   151   6e-35
ref|XP_002274937.2| PREDICTED: uncharacterized protein LOC100260...   142   2e-32
emb|CBI24209.3| unnamed protein product [Vitis vinifera]              142   2e-32

>ref|XP_003607305.1| Chromodomain helicase DNA binding protein [Medicago truncatula]
            gi|355508360|gb|AES89502.1| Chromodomain helicase DNA
            binding protein [Medicago truncatula]
          Length = 1573

 Score =  158 bits (399), Expect = 5e-37
 Identities = 81/92 (88%), Positives = 83/92 (90%), Gaps = 5/92 (5%)
 Frame = -1

Query: 261  GRLSRKLFNWKVLPRSLVIKAARQ-----AGRTKIPGILYPENSDFAKRSRYVAWRAAVE 97
            GRLSRKLFNWKVLPRS V KAARQ     AG TKIPGILYPENSDFAKRSR VAWRAAVE
Sbjct: 1298 GRLSRKLFNWKVLPRSFVAKAARQVLNSAAGFTKIPGILYPENSDFAKRSRCVAWRAAVE 1357

Query: 96   MSTSVEQLALQVRELYSNIRWHDIENNHPLYV 1
            MSTSVEQLALQVRELYSNIRWHDIEN+HPL+V
Sbjct: 1358 MSTSVEQLALQVRELYSNIRWHDIENSHPLHV 1389


>ref|XP_003538947.1| PREDICTED: uncharacterized protein LOC100800973 [Glycine max]
          Length = 1735

 Score =  153 bits (387), Expect = 1e-35
 Identities = 76/87 (87%), Positives = 78/87 (89%)
 Frame = -1

Query: 261  GRLSRKLFNWKVLPRSLVIKAARQAGRTKIPGILYPENSDFAKRSRYVAWRAAVEMSTSV 82
            GRLSRKLFN K LP SLV KAARQ G  KIPGILYPENSDFA+RSR+VAWRAAVEMSTS 
Sbjct: 1211 GRLSRKLFNCKALPHSLVTKAARQGGCRKIPGILYPENSDFARRSRFVAWRAAVEMSTSA 1270

Query: 81   EQLALQVRELYSNIRWHDIENNHPLYV 1
            EQLALQVRELYSNIRWHDIENNH LYV
Sbjct: 1271 EQLALQVRELYSNIRWHDIENNHSLYV 1297


>ref|XP_003540620.1| PREDICTED: uncharacterized protein LOC100791832 [Glycine max]
          Length = 1702

 Score =  151 bits (381), Expect = 6e-35
 Identities = 75/87 (86%), Positives = 78/87 (89%)
 Frame = -1

Query: 261  GRLSRKLFNWKVLPRSLVIKAARQAGRTKIPGILYPENSDFAKRSRYVAWRAAVEMSTSV 82
            GRLSRKLFN K LP SLV KAARQ G  KIPGILYPENSDFA+RSR+VAWRAAVEMSTS 
Sbjct: 1181 GRLSRKLFNCKALPHSLVTKAARQGGCRKIPGILYPENSDFARRSRFVAWRAAVEMSTSA 1240

Query: 81   EQLALQVRELYSNIRWHDIENNHPLYV 1
            EQLALQVRELYSNIRWHDIENN+ LYV
Sbjct: 1241 EQLALQVRELYSNIRWHDIENNYSLYV 1267


>ref|XP_002274937.2| PREDICTED: uncharacterized protein LOC100260139 [Vitis vinifera]
          Length = 1976

 Score =  142 bits (359), Expect = 2e-32
 Identities = 70/86 (81%), Positives = 76/86 (88%)
 Frame = -1

Query: 261  GRLSRKLFNWKVLPRSLVIKAARQAGRTKIPGILYPENSDFAKRSRYVAWRAAVEMSTSV 82
            GRLSRKLFNWKVLPRSL  KAARQAG TKIPGILYPE+S+FAKR++YV WR+AVE STSV
Sbjct: 1139 GRLSRKLFNWKVLPRSLASKAARQAGCTKIPGILYPESSEFAKRNKYVVWRSAVETSTSV 1198

Query: 81   EQLALQVRELYSNIRWHDIENNHPLY 4
            EQLAL VREL  NIRW DIEN HPL+
Sbjct: 1199 EQLALLVRELDLNIRWDDIENTHPLF 1224


>emb|CBI24209.3| unnamed protein product [Vitis vinifera]
          Length = 1805

 Score =  142 bits (359), Expect = 2e-32
 Identities = 70/86 (81%), Positives = 76/86 (88%)
 Frame = -1

Query: 261  GRLSRKLFNWKVLPRSLVIKAARQAGRTKIPGILYPENSDFAKRSRYVAWRAAVEMSTSV 82
            GRLSRKLFNWKVLPRSL  KAARQAG TKIPGILYPE+S+FAKR++YV WR+AVE STSV
Sbjct: 1094 GRLSRKLFNWKVLPRSLASKAARQAGCTKIPGILYPESSEFAKRNKYVVWRSAVETSTSV 1153

Query: 81   EQLALQVRELYSNIRWHDIENNHPLY 4
            EQLAL VREL  NIRW DIEN HPL+
Sbjct: 1154 EQLALLVRELDLNIRWDDIENTHPLF 1179


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