BLASTX nr result

ID: Glycyrrhiza24_contig00032442 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032442
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containi...   139   3e-31
ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containi...   133   1e-29
emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]   133   1e-29
ref|XP_002327945.1| predicted protein [Populus trichocarpa] gi|2...   133   2e-29
ref|XP_002519997.1| pentatricopeptide repeat-containing protein,...   132   4e-29

>ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like [Glycine max]
          Length = 1476

 Score =  139 bits (349), Expect = 3e-31
 Identities = 67/84 (79%), Positives = 73/84 (86%)
 Frame = -2

Query: 252 KKMNKFALRPEKNWRERVNFLTDRILGLKPEESVTDVLEERRVQMLTPTDFCFVVKSVGQ 73
           KKMNK AL+ +KNWRERV +LTD IL LK EE V  VLEERRVQM TPTDFCFVVK VGQ
Sbjct: 134 KKMNKLALKRDKNWRERVKYLTDTILALKSEEFVAGVLEERRVQM-TPTDFCFVVKWVGQ 192

Query: 72  RSWQRALELYECLNLRHWYSPNAR 1
           ++WQRALELYECLNLRHWY+PNAR
Sbjct: 193 QNWQRALELYECLNLRHWYAPNAR 216


>ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like [Vitis vinifera]
          Length = 1442

 Score =  133 bits (335), Expect = 1e-29
 Identities = 65/84 (77%), Positives = 72/84 (85%)
 Frame = -2

Query: 252 KKMNKFALRPEKNWRERVNFLTDRILGLKPEESVTDVLEERRVQMLTPTDFCFVVKSVGQ 73
           KKM K AL+  K+WR+RV FLTDRILGLK EE V DVL++R+VQM TPTDFCFVVK VGQ
Sbjct: 107 KKMTKLALKRAKDWRQRVQFLTDRILGLKSEEFVADVLDDRKVQM-TPTDFCFVVKWVGQ 165

Query: 72  RSWQRALELYECLNLRHWYSPNAR 1
            SWQRALE+YE LNLRHWYSPNAR
Sbjct: 166 SSWQRALEVYEWLNLRHWYSPNAR 189


>emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
          Length = 1494

 Score =  133 bits (335), Expect = 1e-29
 Identities = 65/84 (77%), Positives = 72/84 (85%)
 Frame = -2

Query: 252 KKMNKFALRPEKNWRERVNFLTDRILGLKPEESVTDVLEERRVQMLTPTDFCFVVKSVGQ 73
           KKM K AL+  K+WR+RV FLTDRILGLK EE V DVL++R+VQM TPTDFCFVVK VGQ
Sbjct: 139 KKMTKLALKRAKDWRQRVQFLTDRILGLKSEEFVADVLDDRKVQM-TPTDFCFVVKWVGQ 197

Query: 72  RSWQRALELYECLNLRHWYSPNAR 1
            SWQRALE+YE LNLRHWYSPNAR
Sbjct: 198 SSWQRALEVYEWLNLRHWYSPNAR 221


>ref|XP_002327945.1| predicted protein [Populus trichocarpa] gi|222837354|gb|EEE75733.1|
           predicted protein [Populus trichocarpa]
          Length = 1450

 Score =  133 bits (334), Expect = 2e-29
 Identities = 63/84 (75%), Positives = 71/84 (84%)
 Frame = -2

Query: 252 KKMNKFALRPEKNWRERVNFLTDRILGLKPEESVTDVLEERRVQMLTPTDFCFVVKSVGQ 73
           KKMNK ALR  K+WRERV + TDRILGLK ++ V DVL++R+VQM TPTDFCFVVKSVGQ
Sbjct: 141 KKMNKLALRKAKDWRERVKYFTDRILGLKQDQFVADVLDDRKVQM-TPTDFCFVVKSVGQ 199

Query: 72  RSWQRALELYECLNLRHWYSPNAR 1
            SW RA E+YE LNLRHWYSPNAR
Sbjct: 200 ESWHRAFEVYEWLNLRHWYSPNAR 223


>ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540761|gb|EEF42321.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1429

 Score =  132 bits (331), Expect = 4e-29
 Identities = 62/84 (73%), Positives = 73/84 (86%)
 Frame = -2

Query: 252 KKMNKFALRPEKNWRERVNFLTDRILGLKPEESVTDVLEERRVQMLTPTDFCFVVKSVGQ 73
           KKMNK AL+  K+WRERV FLTDRILGL+P++ V DVL++ +VQM TPTDFCFVVK VGQ
Sbjct: 95  KKMNKLALKRAKDWRERVKFLTDRILGLRPDQFVADVLDDSKVQM-TPTDFCFVVKWVGQ 153

Query: 72  RSWQRALELYECLNLRHWYSPNAR 1
            +WQRALE++E LNLRHWYSPNAR
Sbjct: 154 ENWQRALEVFEWLNLRHWYSPNAR 177


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