BLASTX nr result

ID: Glycyrrhiza24_contig00032437 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032437
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517957.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair p...   123   2e-26
emb|CBI34953.3| unnamed protein product [Vitis vinifera]               68   7e-10
ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3-like [Vit...    68   7e-10

>ref|XP_003517957.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein UVH3-like
           [Glycine max]
          Length = 1707

 Score =  123 bits (308), Expect = 2e-26
 Identities = 66/94 (70%), Positives = 71/94 (75%)
 Frame = -2

Query: 283 NNESEVEWEAGDCDDTKSTLLAAAESGKLASRGRLEEESDLQEAIRRSLESAQDGKLKCV 104
           NNE EVEWE GDCD   STLL    SGKLAS+G LEEESDLQEAIRRSLES  D KLKC+
Sbjct: 699 NNEREVEWEEGDCDGANSTLL----SGKLASQGWLEEESDLQEAIRRSLESIGDMKLKCM 754

Query: 103 SSVDEQLSAYENKLDPELEHGYNLYCSGPVDSND 2
            +VDE  + YENKLD  LEHG +LY S PVD ND
Sbjct: 755 PAVDEHSNTYENKLDCGLEHGDDLYYSDPVDLND 788


>emb|CBI34953.3| unnamed protein product [Vitis vinifera]
          Length = 1449

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 38/76 (50%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
 Frame = -2

Query: 283 NNESEVEWEAGDCDDTKSTLLAAAESGKLASRGRLEEESDLQEAIRRSLESAQDGKLKCV 104
           +++SEVEWE G CD +K+     ++ G  AS+GRLEEE+DLQEAIRRSLE     K    
Sbjct: 513 SDDSEVEWEEGPCDVSKNVSACPSKFGNPASKGRLEEETDLQEAIRRSLEDLGGEKAVGE 572

Query: 103 SSVDEQLSAY-ENKLD 59
           S  D  +  Y E KLD
Sbjct: 573 SFKDSDIKEYDEKKLD 588


>ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3-like [Vitis vinifera]
          Length = 1513

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 35/74 (47%), Positives = 47/74 (63%)
 Frame = -2

Query: 283 NNESEVEWEAGDCDDTKSTLLAAAESGKLASRGRLEEESDLQEAIRRSLESAQDGKLKCV 104
           +++SEVEWE G CD +K+     ++ G  AS+GRLEEE+DLQEAIRRSLE     K    
Sbjct: 513 SDDSEVEWEEGPCDVSKNVSACPSKFGNPASKGRLEEETDLQEAIRRSLEDLGGEKAVGE 572

Query: 103 SSVDEQLSAYENKL 62
           S  D  +  Y+ K+
Sbjct: 573 SFKDSDIKEYDEKV 586


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