BLASTX nr result

ID: Glycyrrhiza24_contig00032425 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032425
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541362.1| PREDICTED: DNA repair and recombination prot...   131   5e-29
emb|CBI37137.3| unnamed protein product [Vitis vinifera]               81   8e-14
ref|XP_002272543.1| PREDICTED: DNA excision repair protein ERCC-...    81   8e-14
emb|CAN67815.1| hypothetical protein VITISV_002502 [Vitis vinifera]    81   8e-14
ref|XP_002886265.1| predicted protein [Arabidopsis lyrata subsp....    62   4e-08

>ref|XP_003541362.1| PREDICTED: DNA repair and recombination protein RAD26-like [Glycine
           max]
          Length = 1210

 Score =  131 bits (330), Expect = 5e-29
 Identities = 70/97 (72%), Positives = 74/97 (76%)
 Frame = -1

Query: 294 IPFRRLKKPLKISKPLDREVELSKDSXXXXXXXXXXXKWTKHVSFEDIQLEESENANGCL 115
           IPFRRLKKPLK SKPLD  VEL+KDS           KWTK VS ED   EESEN NGCL
Sbjct: 296 IPFRRLKKPLKSSKPLD--VELNKDSKRKKRRPLPGRKWTKRVSCEDSHPEESENTNGCL 353

Query: 114 DTSSCENLEAQDVELSEHESSYVTLEGGLKIPENIFE 4
           D+SSCENLE QDVEL + ESSYVTLEGGLKIP+NIFE
Sbjct: 354 DSSSCENLEEQDVELDDQESSYVTLEGGLKIPDNIFE 390


>emb|CBI37137.3| unnamed protein product [Vitis vinifera]
          Length = 1116

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 47/96 (48%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
 Frame = -1

Query: 291 PFRRLKKPLKISKPLDREVELSKDSXXXXXXXXXXXKWTKHVSFEDIQLEESENANGCLD 112
           PF RLKKPLK   PLD EVE +KD            KW K +S E+  LEESE+ +  L 
Sbjct: 303 PFHRLKKPLKYPLPLDSEVEKNKDKKRKKKRPLPSKKWRKIISHEEELLEESEDTSDNLV 362

Query: 111 TSSCENLEAQDVE-LSEHESSYVTLEGGLKIPENIF 7
           TSS E +  +D+E   ++E   VTLEGGL+IPE+IF
Sbjct: 363 TSSNEEVNREDIEDADDNEPPCVTLEGGLRIPESIF 398


>ref|XP_002272543.1| PREDICTED: DNA excision repair protein ERCC-6-like [Vitis vinifera]
          Length = 1227

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 47/96 (48%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
 Frame = -1

Query: 291 PFRRLKKPLKISKPLDREVELSKDSXXXXXXXXXXXKWTKHVSFEDIQLEESENANGCLD 112
           PF RLKKPLK   PLD EVE +KD            KW K +S E+  LEESE+ +  L 
Sbjct: 303 PFHRLKKPLKYPLPLDSEVEKNKDKKRKKKRPLPSKKWRKIISHEEELLEESEDTSDNLV 362

Query: 111 TSSCENLEAQDVE-LSEHESSYVTLEGGLKIPENIF 7
           TSS E +  +D+E   ++E   VTLEGGL+IPE+IF
Sbjct: 363 TSSNEEVNREDIEDADDNEPPCVTLEGGLRIPESIF 398


>emb|CAN67815.1| hypothetical protein VITISV_002502 [Vitis vinifera]
          Length = 1249

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 47/96 (48%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
 Frame = -1

Query: 291 PFRRLKKPLKISKPLDREVELSKDSXXXXXXXXXXXKWTKHVSFEDIQLEESENANGCLD 112
           PF RLKKPLK   PLD EVE +KD            KW K +S E+  LEESE+ +  L 
Sbjct: 325 PFHRLKKPLKYPLPLDSEVEKNKDKKRKKKRPLPGKKWRKIISHEEELLEESEDTSDNLV 384

Query: 111 TSSCENLEAQDVE-LSEHESSYVTLEGGLKIPENIF 7
           TSS E +  +D+E   ++E   VTLEGGL+IPE+IF
Sbjct: 385 TSSNEEVNREDIEDADDNEPPCVTLEGGLRIPESIF 420


>ref|XP_002886265.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297332105|gb|EFH62524.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1181

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 41/97 (42%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
 Frame = -1

Query: 291 PFRRLKKPLKISKPLDREVELSK-DSXXXXXXXXXXXKWTKHVSFEDIQLEESENANGCL 115
           PFRRL+K  K     D EV+ SK               W K +S ED  L+ES +    L
Sbjct: 284 PFRRLRKLYKTPDSPDNEVKKSKAGKKSKKKRPLPEKIWRKRISREDSSLQESGDERRIL 343

Query: 114 DTSSCENLEAQDV-ELSEHESSYVTLEGGLKIPENIF 7
            TSSCE  E  D  +  ++E+S V LEGGL IPE IF
Sbjct: 344 TTSSCEEEELADFDDADDNETSSVQLEGGLNIPECIF 380


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