BLASTX nr result
ID: Glycyrrhiza24_contig00032425
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00032425 (294 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003541362.1| PREDICTED: DNA repair and recombination prot... 131 5e-29 emb|CBI37137.3| unnamed protein product [Vitis vinifera] 81 8e-14 ref|XP_002272543.1| PREDICTED: DNA excision repair protein ERCC-... 81 8e-14 emb|CAN67815.1| hypothetical protein VITISV_002502 [Vitis vinifera] 81 8e-14 ref|XP_002886265.1| predicted protein [Arabidopsis lyrata subsp.... 62 4e-08 >ref|XP_003541362.1| PREDICTED: DNA repair and recombination protein RAD26-like [Glycine max] Length = 1210 Score = 131 bits (330), Expect = 5e-29 Identities = 70/97 (72%), Positives = 74/97 (76%) Frame = -1 Query: 294 IPFRRLKKPLKISKPLDREVELSKDSXXXXXXXXXXXKWTKHVSFEDIQLEESENANGCL 115 IPFRRLKKPLK SKPLD VEL+KDS KWTK VS ED EESEN NGCL Sbjct: 296 IPFRRLKKPLKSSKPLD--VELNKDSKRKKRRPLPGRKWTKRVSCEDSHPEESENTNGCL 353 Query: 114 DTSSCENLEAQDVELSEHESSYVTLEGGLKIPENIFE 4 D+SSCENLE QDVEL + ESSYVTLEGGLKIP+NIFE Sbjct: 354 DSSSCENLEEQDVELDDQESSYVTLEGGLKIPDNIFE 390 >emb|CBI37137.3| unnamed protein product [Vitis vinifera] Length = 1116 Score = 81.3 bits (199), Expect = 8e-14 Identities = 47/96 (48%), Positives = 59/96 (61%), Gaps = 1/96 (1%) Frame = -1 Query: 291 PFRRLKKPLKISKPLDREVELSKDSXXXXXXXXXXXKWTKHVSFEDIQLEESENANGCLD 112 PF RLKKPLK PLD EVE +KD KW K +S E+ LEESE+ + L Sbjct: 303 PFHRLKKPLKYPLPLDSEVEKNKDKKRKKKRPLPSKKWRKIISHEEELLEESEDTSDNLV 362 Query: 111 TSSCENLEAQDVE-LSEHESSYVTLEGGLKIPENIF 7 TSS E + +D+E ++E VTLEGGL+IPE+IF Sbjct: 363 TSSNEEVNREDIEDADDNEPPCVTLEGGLRIPESIF 398 >ref|XP_002272543.1| PREDICTED: DNA excision repair protein ERCC-6-like [Vitis vinifera] Length = 1227 Score = 81.3 bits (199), Expect = 8e-14 Identities = 47/96 (48%), Positives = 59/96 (61%), Gaps = 1/96 (1%) Frame = -1 Query: 291 PFRRLKKPLKISKPLDREVELSKDSXXXXXXXXXXXKWTKHVSFEDIQLEESENANGCLD 112 PF RLKKPLK PLD EVE +KD KW K +S E+ LEESE+ + L Sbjct: 303 PFHRLKKPLKYPLPLDSEVEKNKDKKRKKKRPLPSKKWRKIISHEEELLEESEDTSDNLV 362 Query: 111 TSSCENLEAQDVE-LSEHESSYVTLEGGLKIPENIF 7 TSS E + +D+E ++E VTLEGGL+IPE+IF Sbjct: 363 TSSNEEVNREDIEDADDNEPPCVTLEGGLRIPESIF 398 >emb|CAN67815.1| hypothetical protein VITISV_002502 [Vitis vinifera] Length = 1249 Score = 81.3 bits (199), Expect = 8e-14 Identities = 47/96 (48%), Positives = 59/96 (61%), Gaps = 1/96 (1%) Frame = -1 Query: 291 PFRRLKKPLKISKPLDREVELSKDSXXXXXXXXXXXKWTKHVSFEDIQLEESENANGCLD 112 PF RLKKPLK PLD EVE +KD KW K +S E+ LEESE+ + L Sbjct: 325 PFHRLKKPLKYPLPLDSEVEKNKDKKRKKKRPLPGKKWRKIISHEEELLEESEDTSDNLV 384 Query: 111 TSSCENLEAQDVE-LSEHESSYVTLEGGLKIPENIF 7 TSS E + +D+E ++E VTLEGGL+IPE+IF Sbjct: 385 TSSNEEVNREDIEDADDNEPPCVTLEGGLRIPESIF 420 >ref|XP_002886265.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297332105|gb|EFH62524.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 1181 Score = 62.4 bits (150), Expect = 4e-08 Identities = 41/97 (42%), Positives = 50/97 (51%), Gaps = 2/97 (2%) Frame = -1 Query: 291 PFRRLKKPLKISKPLDREVELSK-DSXXXXXXXXXXXKWTKHVSFEDIQLEESENANGCL 115 PFRRL+K K D EV+ SK W K +S ED L+ES + L Sbjct: 284 PFRRLRKLYKTPDSPDNEVKKSKAGKKSKKKRPLPEKIWRKRISREDSSLQESGDERRIL 343 Query: 114 DTSSCENLEAQDV-ELSEHESSYVTLEGGLKIPENIF 7 TSSCE E D + ++E+S V LEGGL IPE IF Sbjct: 344 TTSSCEEEELADFDDADDNETSSVQLEGGLNIPECIF 380