BLASTX nr result

ID: Glycyrrhiza24_contig00032412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032412
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541011.1| PREDICTED: probable mitochondrial chaperone ...    89   3e-16
ref|XP_002512936.1| ATP binding protein, putative [Ricinus commu...    87   1e-15
ref|XP_002283761.1| PREDICTED: ATP-dependent zinc metalloproteas...    78   8e-13
ref|XP_002283754.1| PREDICTED: ATP-dependent zinc metalloproteas...    78   8e-13
ref|NP_190662.2| cytochrome BC1 synthesis [Arabidopsis thaliana]...    74   2e-11

>ref|XP_003541011.1| PREDICTED: probable mitochondrial chaperone BCS1-B-like [Glycine
           max]
          Length = 477

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 45/92 (48%), Positives = 58/92 (63%)
 Frame = +3

Query: 3   LLRTLARDYLPRELRHYXXXXXXXXXXXXXXXXXXXXIIDEFEALSHNELFNAAELYLKP 182
           LLR+LARDY+P EL HY                    +IDEF  L+ N LF+AA+LYLKP
Sbjct: 17  LLRSLARDYVPAELHHYLRCKLSKLLSSFSSELTL--VIDEFHGLTPNPLFSAAQLYLKP 74

Query: 183 HTSPNTKRFKATMPPKENKISVTMERNEEILD 278
           H +P+TKRF+AT+PPK   +S+ +ERN E  D
Sbjct: 75  HAAPDTKRFRATLPPKSRHVSLLVERNGETTD 106


>ref|XP_002512936.1| ATP binding protein, putative [Ricinus communis]
           gi|223547947|gb|EEF49439.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 501

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 44/92 (47%), Positives = 60/92 (65%)
 Frame = +3

Query: 3   LLRTLARDYLPRELRHYXXXXXXXXXXXXXXXXXXXXIIDEFEALSHNELFNAAELYLKP 182
           LLRT+A+DYLP ELRHY                    +I+E++ L+ N LF AAELYL+P
Sbjct: 29  LLRTVAKDYLPSELRHYIYDKVKNFFNSFSSELTF--VIEEYDNLNDNHLFRAAELYLEP 86

Query: 183 HTSPNTKRFKATMPPKENKISVTMERNEEILD 278
              PN KR K ++P KE+K++V++ERNEEI+D
Sbjct: 87  IIPPNLKRLKISLPKKESKVTVSLERNEEIID 118


>ref|XP_002283761.1| PREDICTED: ATP-dependent zinc metalloprotease FtsH-like isoform 2
           [Vitis vinifera]
          Length = 494

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 38/92 (41%), Positives = 56/92 (60%)
 Frame = +3

Query: 3   LLRTLARDYLPRELRHYXXXXXXXXXXXXXXXXXXXXIIDEFEALSHNELFNAAELYLKP 182
           L+R++ RD +P EL+HY                    +I+EF+   HN+LF AAE+YL  
Sbjct: 20  LIRSIIRDLIPPELQHYLFSRFRGLLGSFTSEFTL--VIEEFDGFGHNQLFRAAEVYLGS 77

Query: 183 HTSPNTKRFKATMPPKENKISVTMERNEEILD 278
             SPN +R + T+P KE+K+SVTM+RNE++ D
Sbjct: 78  VISPNAQRLRVTLPNKESKMSVTMDRNEDVAD 109


>ref|XP_002283754.1| PREDICTED: ATP-dependent zinc metalloprotease FtsH-like isoform 1
           [Vitis vinifera]
          Length = 488

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 38/92 (41%), Positives = 56/92 (60%)
 Frame = +3

Query: 3   LLRTLARDYLPRELRHYXXXXXXXXXXXXXXXXXXXXIIDEFEALSHNELFNAAELYLKP 182
           L+R++ RD +P EL+HY                    +I+EF+   HN+LF AAE+YL  
Sbjct: 20  LIRSIIRDLIPPELQHYLFSRFRGLLGSFTSEFTL--VIEEFDGFGHNQLFRAAEVYLGS 77

Query: 183 HTSPNTKRFKATMPPKENKISVTMERNEEILD 278
             SPN +R + T+P KE+K+SVTM+RNE++ D
Sbjct: 78  VISPNAQRLRVTLPNKESKMSVTMDRNEDVAD 109


>ref|NP_190662.2| cytochrome BC1 synthesis [Arabidopsis thaliana]
           gi|18086343|gb|AAL57634.1| AT3g50930/F18B3_210
           [Arabidopsis thaliana] gi|27363216|gb|AAO11527.1|
           At3g50930/F18B3_210 [Arabidopsis thaliana]
           gi|332645207|gb|AEE78728.1| cytochrome BC1 synthesis
           [Arabidopsis thaliana]
          Length = 576

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 39/92 (42%), Positives = 52/92 (56%)
 Frame = +3

Query: 3   LLRTLARDYLPRELRHYXXXXXXXXXXXXXXXXXXXXIIDEFEALSHNELFNAAELYLKP 182
           L R+L +DYLP E+ HY                    II+EFE  +HNE+F AAE YL  
Sbjct: 74  LARSLVQDYLPDEVHHYISYGFRSIFGYFSSQMTI--IIEEFEGFAHNEVFEAAEAYLAT 131

Query: 183 HTSPNTKRFKATMPPKENKISVTMERNEEILD 278
             SP+ KR K +   KEN  +VT+ER+EE++D
Sbjct: 132 KISPSNKRIKVSKHEKENNYNVTVERDEEVVD 163


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