BLASTX nr result

ID: Glycyrrhiza24_contig00032411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032411
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containi...   219   2e-55
ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containi...   213   2e-53
ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containi...   199   3e-49
ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containi...   199   3e-49
ref|XP_002303960.1| predicted protein [Populus trichocarpa] gi|2...   196   1e-48

>ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 816

 Score =  219 bits (557), Expect = 2e-55
 Identities = 101/116 (87%), Positives = 112/116 (96%)
 Frame = -2

Query: 349 LEPAMDHYGAMVDLLGRAGKLDDAWNFIREMPIDPGMTVLGAMLGACKIHKNVELGEKAA 170
           LEP MDHYGAMVDLLGRAG+LDDAW FI++MP+ PG+TVLGAMLGAC+IHKNVELGEK A
Sbjct: 578 LEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKTA 637

Query: 169 DKLFELDPDEGGYHVLLANMYASASMWDKVAKVRTAMEKKGLQKTPGCSLVELRNE 2
           D+LF+LDPD+GGYHVLLANMYASASMWDKVA+VRTAMEKKG+QKTPGCSLVELRNE
Sbjct: 638 DELFDLDPDDGGYHVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSLVELRNE 693


>ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 818

 Score =  213 bits (541), Expect = 2e-53
 Identities = 102/116 (87%), Positives = 108/116 (93%)
 Frame = -2

Query: 349 LEPAMDHYGAMVDLLGRAGKLDDAWNFIREMPIDPGMTVLGAMLGACKIHKNVELGEKAA 170
           LEP MDHY AMVDLLGRAG+LDDAWNFI+EMPI PG++VLGAMLGACKIHKNVELGEKAA
Sbjct: 580 LEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAA 639

Query: 169 DKLFELDPDEGGYHVLLANMYASASMWDKVAKVRTAMEKKGLQKTPGCSLVELRNE 2
            KLF+LDPDEGGYHVLLAN+YAS SMWDKVAKVRTAME KGL KTPGCS VELRNE
Sbjct: 640 QKLFKLDPDEGGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCSWVELRNE 695


>ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  199 bits (505), Expect = 3e-49
 Identities = 92/116 (79%), Positives = 105/116 (90%)
 Frame = -2

Query: 349 LEPAMDHYGAMVDLLGRAGKLDDAWNFIREMPIDPGMTVLGAMLGACKIHKNVELGEKAA 170
           LEP+MDHYGAMVDLLGRAG++ +AW+FI  MPI PG+TV GAMLGACKIHKN+E+GEKAA
Sbjct: 583 LEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAA 642

Query: 169 DKLFELDPDEGGYHVLLANMYASASMWDKVAKVRTAMEKKGLQKTPGCSLVELRNE 2
            KLFEL+PDEGGYHVLLAN+YAS S W KVA+VR  MEKKGL+KTPGCS+VELRNE
Sbjct: 643 KKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNE 698


>ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 849

 Score =  199 bits (505), Expect = 3e-49
 Identities = 90/116 (77%), Positives = 111/116 (95%)
 Frame = -2

Query: 349 LEPAMDHYGAMVDLLGRAGKLDDAWNFIREMPIDPGMTVLGAMLGACKIHKNVELGEKAA 170
           LEPAMDHYGAMVDLLGRA +L++AW+FI++MPI+P ++V GAMLGAC+IHKNVELGEKAA
Sbjct: 611 LEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAA 670

Query: 169 DKLFELDPDEGGYHVLLANMYASASMWDKVAKVRTAMEKKGLQKTPGCSLVELRNE 2
           +++F+LDPD+GGYHVLLAN+YA+ASMWDKVA+VRT MEKKG+QKTPG S+VEL+NE
Sbjct: 671 NRIFDLDPDDGGYHVLLANIYATASMWDKVARVRTTMEKKGIQKTPGWSVVELQNE 726


>ref|XP_002303960.1| predicted protein [Populus trichocarpa] gi|222841392|gb|EEE78939.1|
           predicted protein [Populus trichocarpa]
          Length = 704

 Score =  196 bits (499), Expect = 1e-48
 Identities = 91/116 (78%), Positives = 107/116 (92%)
 Frame = -2

Query: 349 LEPAMDHYGAMVDLLGRAGKLDDAWNFIREMPIDPGMTVLGAMLGACKIHKNVELGEKAA 170
           +EP MDHYGAMVDLLGRAG+L+ AW+FI++MPI PG+TV GAMLGACKIHKNV+LGEKAA
Sbjct: 466 IEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAA 525

Query: 169 DKLFELDPDEGGYHVLLANMYASASMWDKVAKVRTAMEKKGLQKTPGCSLVELRNE 2
            ++F+L+PD+GGYHVLLAN+YA+ASMW KVAKVRT MEK GLQKTPGCSLVE+ NE
Sbjct: 526 FEIFKLNPDDGGYHVLLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNE 581


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