BLASTX nr result

ID: Glycyrrhiza24_contig00032402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032402
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527712.1| PREDICTED: uncharacterized protein LOC100782...   130   1e-28
ref|XP_003602994.1| Gamma-tubulin complex component 4 [Medicago ...   127   1e-27
ref|XP_002282254.1| PREDICTED: uncharacterized protein LOC100247...    91   1e-16
emb|CAN72176.1| hypothetical protein VITISV_012536 [Vitis vinifera]    91   1e-16
ref|XP_002329950.1| tubulin gamma complex-associated protein [Po...    80   1e-13

>ref|XP_003527712.1| PREDICTED: uncharacterized protein LOC100782299 [Glycine max]
          Length = 1002

 Score =  130 bits (327), Expect = 1e-28
 Identities = 68/85 (80%), Positives = 78/85 (91%), Gaps = 1/85 (1%)
 Frame = +3

Query: 3   SYLLRILQHSKLDADF-ASTNYISNSVPASHDKKEMGRRDSISLSNTIKGKEQSIRDCPA 179
           SYLLR LQHSKLD++F +STNY+++SVPAS+DK EM RRDSISLS+T+KGKE SIRD PA
Sbjct: 271 SYLLRRLQHSKLDSEFFSSTNYVNDSVPASNDK-EMDRRDSISLSSTVKGKEPSIRDRPA 329

Query: 180 CPFFIKDLAKSIISAGKSLQLMRHV 254
           CPFFIKDL KSI+SAGKSLQLMRHV
Sbjct: 330 CPFFIKDLTKSIVSAGKSLQLMRHV 354


>ref|XP_003602994.1| Gamma-tubulin complex component 4 [Medicago truncatula]
           gi|355492042|gb|AES73245.1| Gamma-tubulin complex
           component 4 [Medicago truncatula]
          Length = 1076

 Score =  127 bits (319), Expect = 1e-27
 Identities = 62/83 (74%), Positives = 72/83 (86%)
 Frame = +3

Query: 3   SYLLRILQHSKLDADFASTNYISNSVPASHDKKEMGRRDSISLSNTIKGKEQSIRDCPAC 182
           S L+R LQH K D + +ST Y  +S+PAS++KKEMG RDSISLS+TIKGK+QS+RDCPAC
Sbjct: 271 SCLIRKLQHRKSDTELSSTIYAGDSIPASNEKKEMGMRDSISLSSTIKGKDQSVRDCPAC 330

Query: 183 PFFIKDLAKSIISAGKSLQLMRH 251
           P FIKDLAKSIISAGKSLQLMRH
Sbjct: 331 PLFIKDLAKSIISAGKSLQLMRH 353


>ref|XP_002282254.1| PREDICTED: uncharacterized protein LOC100247210 [Vitis vinifera]
          Length = 1023

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 47/84 (55%), Positives = 64/84 (76%)
 Frame = +3

Query: 3   SYLLRILQHSKLDADFASTNYISNSVPASHDKKEMGRRDSISLSNTIKGKEQSIRDCPAC 182
           SYLLR LQ   LD + ++    S+ +P+++DKKEM  R+SIS S+++KGKEQS +D   C
Sbjct: 285 SYLLRPLQ--SLDVELSAMIGTSSRLPSTNDKKEMAGRESISTSSSMKGKEQSSKDLKLC 342

Query: 183 PFFIKDLAKSIISAGKSLQLMRHV 254
           P F++D+AK IISAGKSLQL+RHV
Sbjct: 343 PLFVEDIAKPIISAGKSLQLIRHV 366


>emb|CAN72176.1| hypothetical protein VITISV_012536 [Vitis vinifera]
          Length = 740

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 47/84 (55%), Positives = 64/84 (76%)
 Frame = +3

Query: 3   SYLLRILQHSKLDADFASTNYISNSVPASHDKKEMGRRDSISLSNTIKGKEQSIRDCPAC 182
           SYLLR LQ   LD + ++    S+ +P+++DKKEM  R+SIS S+++KGKEQS +D   C
Sbjct: 283 SYLLRPLQ--SLDVELSAMIGTSSRLPSTNDKKEMAGRESISTSSSMKGKEQSSKDLKLC 340

Query: 183 PFFIKDLAKSIISAGKSLQLMRHV 254
           P F++D+AK IISAGKSLQL+RHV
Sbjct: 341 PLFVEDIAKPIISAGKSLQLIRHV 364


>ref|XP_002329950.1| tubulin gamma complex-associated protein [Populus trichocarpa]
           gi|222871972|gb|EEF09103.1| tubulin gamma
           complex-associated protein [Populus trichocarpa]
          Length = 977

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 43/84 (51%), Positives = 58/84 (69%)
 Frame = +3

Query: 3   SYLLRILQHSKLDADFASTNYISNSVPASHDKKEMGRRDSISLSNTIKGKEQSIRDCPAC 182
           SY LR LQ  KLD        I++S+P S++K  MG +DSI  S   KGKE ++++   C
Sbjct: 264 SYQLRRLQCRKLD--------INSSIPLSNNKTGMGEKDSIPFSEFKKGKELNVKELLVC 315

Query: 183 PFFIKDLAKSIISAGKSLQLMRHV 254
           P FIK+++KSI+SAGKSLQL+RHV
Sbjct: 316 PLFIKEISKSIVSAGKSLQLIRHV 339


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