BLASTX nr result
ID: Glycyrrhiza24_contig00032402
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00032402 (255 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003527712.1| PREDICTED: uncharacterized protein LOC100782... 130 1e-28 ref|XP_003602994.1| Gamma-tubulin complex component 4 [Medicago ... 127 1e-27 ref|XP_002282254.1| PREDICTED: uncharacterized protein LOC100247... 91 1e-16 emb|CAN72176.1| hypothetical protein VITISV_012536 [Vitis vinifera] 91 1e-16 ref|XP_002329950.1| tubulin gamma complex-associated protein [Po... 80 1e-13 >ref|XP_003527712.1| PREDICTED: uncharacterized protein LOC100782299 [Glycine max] Length = 1002 Score = 130 bits (327), Expect = 1e-28 Identities = 68/85 (80%), Positives = 78/85 (91%), Gaps = 1/85 (1%) Frame = +3 Query: 3 SYLLRILQHSKLDADF-ASTNYISNSVPASHDKKEMGRRDSISLSNTIKGKEQSIRDCPA 179 SYLLR LQHSKLD++F +STNY+++SVPAS+DK EM RRDSISLS+T+KGKE SIRD PA Sbjct: 271 SYLLRRLQHSKLDSEFFSSTNYVNDSVPASNDK-EMDRRDSISLSSTVKGKEPSIRDRPA 329 Query: 180 CPFFIKDLAKSIISAGKSLQLMRHV 254 CPFFIKDL KSI+SAGKSLQLMRHV Sbjct: 330 CPFFIKDLTKSIVSAGKSLQLMRHV 354 >ref|XP_003602994.1| Gamma-tubulin complex component 4 [Medicago truncatula] gi|355492042|gb|AES73245.1| Gamma-tubulin complex component 4 [Medicago truncatula] Length = 1076 Score = 127 bits (319), Expect = 1e-27 Identities = 62/83 (74%), Positives = 72/83 (86%) Frame = +3 Query: 3 SYLLRILQHSKLDADFASTNYISNSVPASHDKKEMGRRDSISLSNTIKGKEQSIRDCPAC 182 S L+R LQH K D + +ST Y +S+PAS++KKEMG RDSISLS+TIKGK+QS+RDCPAC Sbjct: 271 SCLIRKLQHRKSDTELSSTIYAGDSIPASNEKKEMGMRDSISLSSTIKGKDQSVRDCPAC 330 Query: 183 PFFIKDLAKSIISAGKSLQLMRH 251 P FIKDLAKSIISAGKSLQLMRH Sbjct: 331 PLFIKDLAKSIISAGKSLQLMRH 353 >ref|XP_002282254.1| PREDICTED: uncharacterized protein LOC100247210 [Vitis vinifera] Length = 1023 Score = 90.9 bits (224), Expect = 1e-16 Identities = 47/84 (55%), Positives = 64/84 (76%) Frame = +3 Query: 3 SYLLRILQHSKLDADFASTNYISNSVPASHDKKEMGRRDSISLSNTIKGKEQSIRDCPAC 182 SYLLR LQ LD + ++ S+ +P+++DKKEM R+SIS S+++KGKEQS +D C Sbjct: 285 SYLLRPLQ--SLDVELSAMIGTSSRLPSTNDKKEMAGRESISTSSSMKGKEQSSKDLKLC 342 Query: 183 PFFIKDLAKSIISAGKSLQLMRHV 254 P F++D+AK IISAGKSLQL+RHV Sbjct: 343 PLFVEDIAKPIISAGKSLQLIRHV 366 >emb|CAN72176.1| hypothetical protein VITISV_012536 [Vitis vinifera] Length = 740 Score = 90.9 bits (224), Expect = 1e-16 Identities = 47/84 (55%), Positives = 64/84 (76%) Frame = +3 Query: 3 SYLLRILQHSKLDADFASTNYISNSVPASHDKKEMGRRDSISLSNTIKGKEQSIRDCPAC 182 SYLLR LQ LD + ++ S+ +P+++DKKEM R+SIS S+++KGKEQS +D C Sbjct: 283 SYLLRPLQ--SLDVELSAMIGTSSRLPSTNDKKEMAGRESISTSSSMKGKEQSSKDLKLC 340 Query: 183 PFFIKDLAKSIISAGKSLQLMRHV 254 P F++D+AK IISAGKSLQL+RHV Sbjct: 341 PLFVEDIAKPIISAGKSLQLIRHV 364 >ref|XP_002329950.1| tubulin gamma complex-associated protein [Populus trichocarpa] gi|222871972|gb|EEF09103.1| tubulin gamma complex-associated protein [Populus trichocarpa] Length = 977 Score = 80.5 bits (197), Expect = 1e-13 Identities = 43/84 (51%), Positives = 58/84 (69%) Frame = +3 Query: 3 SYLLRILQHSKLDADFASTNYISNSVPASHDKKEMGRRDSISLSNTIKGKEQSIRDCPAC 182 SY LR LQ KLD I++S+P S++K MG +DSI S KGKE ++++ C Sbjct: 264 SYQLRRLQCRKLD--------INSSIPLSNNKTGMGEKDSIPFSEFKKGKELNVKELLVC 315 Query: 183 PFFIKDLAKSIISAGKSLQLMRHV 254 P FIK+++KSI+SAGKSLQL+RHV Sbjct: 316 PLFIKEISKSIVSAGKSLQLIRHV 339