BLASTX nr result

ID: Glycyrrhiza24_contig00032371 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032371
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containi...   192   2e-47
ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago t...   174   7e-42
ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containi...   108   4e-22
ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containi...   107   8e-22
dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]    106   2e-21

>ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Glycine max]
          Length = 540

 Score =  192 bits (489), Expect = 2e-47
 Identities = 91/104 (87%), Positives = 98/104 (94%)
 Frame = -1

Query: 312 LIRSMPMKPDVYVWGALLGGCQMHGNVELGEKVACHLIELEPHSHAFYMNLCDIYAKAGR 133
           LIRSMPMKPDVYVWGALLGGCQMHGNVELGEKV  HLI+LEPH+HAFY+N CDIYAKAG 
Sbjct: 420 LIRSMPMKPDVYVWGALLGGCQMHGNVELGEKVVHHLIDLEPHNHAFYVNWCDIYAKAGM 479

Query: 132 FNAAKGIRNLMKERRIERKIPGCSMIEINGVVQEFSAGGSSELP 1
           F+AAK IRN+MKE+RIE+KIPGCSMIEING VQEFSAGGSSELP
Sbjct: 480 FDAAKRIRNIMKEKRIEKKIPGCSMIEINGEVQEFSAGGSSELP 523


>ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355497290|gb|AES78493.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 541

 Score =  174 bits (441), Expect = 7e-42
 Identities = 81/98 (82%), Positives = 91/98 (92%)
 Frame = -1

Query: 312 LIRSMPMKPDVYVWGALLGGCQMHGNVELGEKVACHLIELEPHSHAFYMNLCDIYAKAGR 133
           LIRSMPMKPDVYVWGALLGGCQMHGN++LGEKVA +LI+LEPH+HAFY+NLCDIY KAG+
Sbjct: 424 LIRSMPMKPDVYVWGALLGGCQMHGNIKLGEKVAHYLIDLEPHNHAFYINLCDIYVKAGK 483

Query: 132 FNAAKGIRNLMKERRIERKIPGCSMIEINGVVQEFSAG 19
           ++AAK IRN MKER IE KIPGCS+IEINGVVQEFS G
Sbjct: 484 YDAAKRIRNSMKERGIETKIPGCSIIEINGVVQEFSVG 521


>ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score =  108 bits (270), Expect = 4e-22
 Identities = 53/101 (52%), Positives = 70/101 (69%)
 Frame = -1

Query: 312 LIRSMPMKPDVYVWGALLGGCQMHGNVELGEKVACHLIELEPHSHAFYMNLCDIYAKAGR 133
           LI SMPMKP+  VWGALLG C++HGN +L E+V   L+ELEP +   Y+ L +IYAK GR
Sbjct: 453 LINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGR 512

Query: 132 FNAAKGIRNLMKERRIERKIPGCSMIEINGVVQEFSAGGSS 10
           F+    IR LMK+R I + +PG S++++NG V EF  G  S
Sbjct: 513 FDDVSKIRKLMKDRGI-KTVPGVSIVDLNGTVHEFKMGDGS 552


>ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score =  107 bits (268), Expect = 8e-22
 Identities = 53/101 (52%), Positives = 69/101 (68%)
 Frame = -1

Query: 312 LIRSMPMKPDVYVWGALLGGCQMHGNVELGEKVACHLIELEPHSHAFYMNLCDIYAKAGR 133
           LI SMPMKP+  VWGALLG C++HGN +L E+V   L+ELEP +   Y+ L +IYAK GR
Sbjct: 453 LINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGR 512

Query: 132 FNAAKGIRNLMKERRIERKIPGCSMIEINGVVQEFSAGGSS 10
           F+    IR LMK R I + +PG S++++NG V EF  G  S
Sbjct: 513 FDDVSKIRKLMKNRGI-KTVPGVSIVDLNGTVHEFKMGDGS 552


>dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 598

 Score =  106 bits (265), Expect = 2e-21
 Identities = 51/101 (50%), Positives = 68/101 (67%)
 Frame = -1

Query: 312 LIRSMPMKPDVYVWGALLGGCQMHGNVELGEKVACHLIELEPHSHAFYMNLCDIYAKAGR 133
           ++  MPMKPD  +WGAL+ GC+ H NVEL E V  H IELEP     Y+ L +IY+ +GR
Sbjct: 384 MVEKMPMKPDALIWGALMAGCRFHKNVELAEYVIKHWIELEPDKSGAYVLLGNIYSASGR 443

Query: 132 FNAAKGIRNLMKERRIERKIPGCSMIEINGVVQEFSAGGSS 10
             +A+ IRNLM+E+ +E K PGCS +EI GV+ +F  G  S
Sbjct: 444 HASAREIRNLMREKGVE-KTPGCSNVEIKGVIHQFIVGDLS 483


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