BLASTX nr result
ID: Glycyrrhiza24_contig00032371
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00032371 (312 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containi... 192 2e-47 ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago t... 174 7e-42 ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containi... 108 4e-22 ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containi... 107 8e-22 dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare] 106 2e-21 >ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Glycine max] Length = 540 Score = 192 bits (489), Expect = 2e-47 Identities = 91/104 (87%), Positives = 98/104 (94%) Frame = -1 Query: 312 LIRSMPMKPDVYVWGALLGGCQMHGNVELGEKVACHLIELEPHSHAFYMNLCDIYAKAGR 133 LIRSMPMKPDVYVWGALLGGCQMHGNVELGEKV HLI+LEPH+HAFY+N CDIYAKAG Sbjct: 420 LIRSMPMKPDVYVWGALLGGCQMHGNVELGEKVVHHLIDLEPHNHAFYVNWCDIYAKAGM 479 Query: 132 FNAAKGIRNLMKERRIERKIPGCSMIEINGVVQEFSAGGSSELP 1 F+AAK IRN+MKE+RIE+KIPGCSMIEING VQEFSAGGSSELP Sbjct: 480 FDAAKRIRNIMKEKRIEKKIPGCSMIEINGEVQEFSAGGSSELP 523 >ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago truncatula] gi|355497290|gb|AES78493.1| Pentatricopeptide repeat protein [Medicago truncatula] Length = 541 Score = 174 bits (441), Expect = 7e-42 Identities = 81/98 (82%), Positives = 91/98 (92%) Frame = -1 Query: 312 LIRSMPMKPDVYVWGALLGGCQMHGNVELGEKVACHLIELEPHSHAFYMNLCDIYAKAGR 133 LIRSMPMKPDVYVWGALLGGCQMHGN++LGEKVA +LI+LEPH+HAFY+NLCDIY KAG+ Sbjct: 424 LIRSMPMKPDVYVWGALLGGCQMHGNIKLGEKVAHYLIDLEPHNHAFYINLCDIYVKAGK 483 Query: 132 FNAAKGIRNLMKERRIERKIPGCSMIEINGVVQEFSAG 19 ++AAK IRN MKER IE KIPGCS+IEINGVVQEFS G Sbjct: 484 YDAAKRIRNSMKERGIETKIPGCSIIEINGVVQEFSVG 521 >ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910-like [Cucumis sativus] Length = 666 Score = 108 bits (270), Expect = 4e-22 Identities = 53/101 (52%), Positives = 70/101 (69%) Frame = -1 Query: 312 LIRSMPMKPDVYVWGALLGGCQMHGNVELGEKVACHLIELEPHSHAFYMNLCDIYAKAGR 133 LI SMPMKP+ VWGALLG C++HGN +L E+V L+ELEP + Y+ L +IYAK GR Sbjct: 453 LINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGR 512 Query: 132 FNAAKGIRNLMKERRIERKIPGCSMIEINGVVQEFSAGGSS 10 F+ IR LMK+R I + +PG S++++NG V EF G S Sbjct: 513 FDDVSKIRKLMKDRGI-KTVPGVSIVDLNGTVHEFKMGDGS 552 >ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910-like [Cucumis sativus] Length = 666 Score = 107 bits (268), Expect = 8e-22 Identities = 53/101 (52%), Positives = 69/101 (68%) Frame = -1 Query: 312 LIRSMPMKPDVYVWGALLGGCQMHGNVELGEKVACHLIELEPHSHAFYMNLCDIYAKAGR 133 LI SMPMKP+ VWGALLG C++HGN +L E+V L+ELEP + Y+ L +IYAK GR Sbjct: 453 LINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGR 512 Query: 132 FNAAKGIRNLMKERRIERKIPGCSMIEINGVVQEFSAGGSS 10 F+ IR LMK R I + +PG S++++NG V EF G S Sbjct: 513 FDDVSKIRKLMKNRGI-KTVPGVSIVDLNGTVHEFKMGDGS 552 >dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 598 Score = 106 bits (265), Expect = 2e-21 Identities = 51/101 (50%), Positives = 68/101 (67%) Frame = -1 Query: 312 LIRSMPMKPDVYVWGALLGGCQMHGNVELGEKVACHLIELEPHSHAFYMNLCDIYAKAGR 133 ++ MPMKPD +WGAL+ GC+ H NVEL E V H IELEP Y+ L +IY+ +GR Sbjct: 384 MVEKMPMKPDALIWGALMAGCRFHKNVELAEYVIKHWIELEPDKSGAYVLLGNIYSASGR 443 Query: 132 FNAAKGIRNLMKERRIERKIPGCSMIEINGVVQEFSAGGSS 10 +A+ IRNLM+E+ +E K PGCS +EI GV+ +F G S Sbjct: 444 HASAREIRNLMREKGVE-KTPGCSNVEIKGVIHQFIVGDLS 483