BLASTX nr result

ID: Glycyrrhiza24_contig00032370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032370
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548655.1| PREDICTED: uncharacterized protein LOC100792...   144   6e-33
ref|XP_003556722.1| PREDICTED: uncharacterized protein LOC100797...   144   1e-32
gb|ABN08564.1| RNA-directed DNA polymerase (Reverse transcriptas...   143   2e-32
gb|ABN05910.1| RNA-directed DNA polymerase (Reverse transcriptas...   142   4e-32
ref|XP_003525866.1| PREDICTED: uncharacterized protein LOC100779...   141   6e-32

>ref|XP_003548655.1| PREDICTED: uncharacterized protein LOC100792785 [Glycine max]
          Length = 685

 Score =  144 bits (364), Expect = 6e-33
 Identities = 70/127 (55%), Positives = 91/127 (71%)
 Frame = -3

Query: 387 HPQTLLEYRPISLIGSMYKIXXXXXXXXXXXXLGKVISPCQSAFLPGRQIMDGVLVVNEI 208
           HPQ+L +YRPISLIG MYK+            +  +I   QSAF+  R I+ GVL++NE+
Sbjct: 202 HPQSLNDYRPISLIGCMYKVIAKLLANRLRSVISGIIDERQSAFIKDRHILHGVLILNEV 261

Query: 207 VDLAKKMRDKCLLFKVDFEKAYDSVSWSHLDYMLIRLGFNDLWRKWMKACIFSSSISVLV 28
           V+ A K +   ++FKVDF+KAYDSVSWS LDYMLIRLGF   WRKW+ AC+ S++IS+LV
Sbjct: 262 VEEALKRKKPVMVFKVDFKKAYDSVSWSFLDYMLIRLGFYPKWRKWIAACLQSATISILV 321

Query: 27  NGSPTDD 7
           NGSPT +
Sbjct: 322 NGSPTKE 328


>ref|XP_003556722.1| PREDICTED: uncharacterized protein LOC100797642 [Glycine max]
          Length = 2447

 Score =  144 bits (362), Expect = 1e-32
 Identities = 67/129 (51%), Positives = 92/129 (71%)
 Frame = -3

Query: 390  DHPQTLLEYRPISLIGSMYKIXXXXXXXXXXXXLGKVISPCQSAFLPGRQIMDGVLVVNE 211
            +HPQ+L +YRPISLIG MYK+            +  ++   QSAF+  R I+ G++++NE
Sbjct: 1597 NHPQSLNDYRPISLIGCMYKVISKLLANRLRTVISGIVDERQSAFIKDRHILHGIMILNE 1656

Query: 210  IVDLAKKMRDKCLLFKVDFEKAYDSVSWSHLDYMLIRLGFNDLWRKWMKACIFSSSISVL 31
            +V+ A K +   ++FKVDFEKAYD+VSWS LDYML RLGF   WR+W+ AC+ S+SIS+L
Sbjct: 1657 VVEEAMKTKQPVMVFKVDFEKAYDTVSWSFLDYMLSRLGFCTKWRQWIAACLQSTSISIL 1716

Query: 30   VNGSPTDDF 4
            VNGSPT +F
Sbjct: 1717 VNGSPTKEF 1725



 Score =  132 bits (333), Expect = 2e-29
 Identities = 62/129 (48%), Positives = 88/129 (68%)
 Frame = -3

Query: 390 DHPQTLLEYRPISLIGSMYKIXXXXXXXXXXXXLGKVISPCQSAFLPGRQIMDGVLVVNE 211
           +HPQT  +YRPIS IG MYK+            +  +I   Q+AF+  R I+ G L++NE
Sbjct: 571 NHPQTFDDYRPISFIGCMYKVIAKLLANRLKLVISALIDERQTAFIKERHILHGTLILNE 630

Query: 210 IVDLAKKMRDKCLLFKVDFEKAYDSVSWSHLDYMLIRLGFNDLWRKWMKACIFSSSISVL 31
           +++ A + +   ++FKVDFEKAYD VSWS LDYML R+GF   WR+W+ AC+ +++ISVL
Sbjct: 631 VIEEACRCKKPVMVFKVDFEKAYDPVSWSFLDYMLQRMGFCPKWRQWISACLTTATISVL 690

Query: 30  VNGSPTDDF 4
           VNGSP+ +F
Sbjct: 691 VNGSPSKEF 699


>gb|ABN08564.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 977

 Score =  143 bits (360), Expect = 2e-32
 Identities = 66/127 (51%), Positives = 90/127 (70%)
 Frame = -3

Query: 387 HPQTLLEYRPISLIGSMYKIXXXXXXXXXXXXLGKVISPCQSAFLPGRQIMDGVLVVNEI 208
           +P TL E+RPISL+G +YK+            +  +IS  QSAF+ GR ++DGVLV+NE+
Sbjct: 461 NPFTLKEFRPISLLGCLYKLLSTVLAARLSLVMKSIISSSQSAFIKGRNLVDGVLVINEV 520

Query: 207 VDLAKKMRDKCLLFKVDFEKAYDSVSWSHLDYMLIRLGFNDLWRKWMKACIFSSSISVLV 28
           VD AK+   +CL+FKVDFEKAYDSV WS L+YML R+ F   W  WM+AC+F   +S+LV
Sbjct: 521 VDYAKRANRECLIFKVDFEKAYDSVDWSFLEYMLRRVDFCSKWIAWMRACVFGGYMSILV 580

Query: 27  NGSPTDD 7
           NG+PT++
Sbjct: 581 NGTPTEE 587


>gb|ABN05910.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 367

 Score =  142 bits (357), Expect = 4e-32
 Identities = 63/126 (50%), Positives = 90/126 (71%)
 Frame = -3

Query: 384 PQTLLEYRPISLIGSMYKIXXXXXXXXXXXXLGKVISPCQSAFLPGRQIMDGVLVVNEIV 205
           P +L+++RPISL+GS+YK+            +  +IS  +SAFL GR ++DGV+V+NE+V
Sbjct: 143 PFSLMDFRPISLLGSLYKLISKVLACRLSKVMASIISNSRSAFLKGRNLVDGVVVINEVV 202

Query: 204 DLAKKMRDKCLLFKVDFEKAYDSVSWSHLDYMLIRLGFNDLWRKWMKACIFSSSISVLVN 25
           DLAKK + +CL+ KVDFEKAYDSV W  L+YM+ R+G  D W  WMK C+F  ++S+L+N
Sbjct: 203 DLAKKPKRECLILKVDFEKAYDSVDWGFLEYMMKRVGMCDTWILWMKVCVFGGNMSILIN 262

Query: 24  GSPTDD 7
           GSP  +
Sbjct: 263 GSPVKE 268


>ref|XP_003525866.1| PREDICTED: uncharacterized protein LOC100779593 [Glycine max]
          Length = 448

 Score =  141 bits (355), Expect = 6e-32
 Identities = 69/128 (53%), Positives = 90/128 (70%)
 Frame = -3

Query: 387 HPQTLLEYRPISLIGSMYKIXXXXXXXXXXXXLGKVISPCQSAFLPGRQIMDGVLVVNEI 208
           HPQ+L +YRPISLIG MYK+            L ++I   QSAF+  R I+ G+L++NE+
Sbjct: 284 HPQSLNDYRPISLIGCMYKVIAKLLENRLRSVLSRIIDERQSAFIKDRHILHGILILNEV 343

Query: 207 VDLAKKMRDKCLLFKVDFEKAYDSVSWSHLDYMLIRLGFNDLWRKWMKACIFSSSISVLV 28
           V+ A K +   ++FKVDFEKAYDSVSWS LDYML RLGF   WRKW+ AC+  ++I +LV
Sbjct: 344 VEEALKRKKPVMVFKVDFEKAYDSVSWSFLDYMLSRLGFCLKWRKWITACLQLATILILV 403

Query: 27  NGSPTDDF 4
           NGSPT +F
Sbjct: 404 NGSPTKEF 411


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