BLASTX nr result

ID: Glycyrrhiza24_contig00032353 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032353
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   144   7e-33
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   144   7e-33
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         143   1e-32
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   143   1e-32
ref|XP_003553324.1| PREDICTED: uncharacterized protein LOC100811...   142   3e-32

>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  144 bits (363), Expect = 7e-33
 Identities = 69/153 (45%), Positives = 100/153 (65%)
 Frame = +2

Query: 17   EVTAYSDSDWCGDQTDRKSTSGYLFKFLGVPISWCSKKQSVVALSTXXXXXXXXXXXXXX 196
            ++  YSDSDW GD  DRKSTSG++F       +W SKKQ +V LST              
Sbjct: 1189 KLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVVLSTCEAEYVAATSCVCH 1248

Query: 197  TLWLESLLEELQIQYKKPVQLFVDNKSSISLAKNPIAHGRSKHIETKFHFLRDQVNKARI 376
             +WL +LL+EL +  ++P ++FVDNKS+I+LAKNP+ H RSKHI+T++H++R+ V+K  +
Sbjct: 1249 AIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDV 1308

Query: 377  ELIHCSTDLQAADILTKALKTDRFKVLREMLGL 475
            +L +  T  Q ADI TK LK + F  +R +LG+
Sbjct: 1309 QLEYVKTHDQVADIFTKPLKREDFIKMRSLLGV 1341


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  144 bits (363), Expect = 7e-33
 Identities = 69/153 (45%), Positives = 100/153 (65%)
 Frame = +2

Query: 17   EVTAYSDSDWCGDQTDRKSTSGYLFKFLGVPISWCSKKQSVVALSTXXXXXXXXXXXXXX 196
            ++  YSDSDW GD  DRKSTSG++F       +W SKKQ +V LST              
Sbjct: 1157 KLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCH 1216

Query: 197  TLWLESLLEELQIQYKKPVQLFVDNKSSISLAKNPIAHGRSKHIETKFHFLRDQVNKARI 376
             +WL +LL+EL +  ++P ++FVDNKS+I+LAKNP+ H RSKHI+T++H++R+ V+K  +
Sbjct: 1217 AIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDV 1276

Query: 377  ELIHCSTDLQAADILTKALKTDRFKVLREMLGL 475
            +L +  T  Q ADI TK LK + F  +R +LG+
Sbjct: 1277 QLEYVKTHDQVADIFTKPLKREDFIKMRSLLGV 1309


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  143 bits (361), Expect = 1e-32
 Identities = 68/153 (44%), Positives = 99/153 (64%)
 Frame = +2

Query: 17   EVTAYSDSDWCGDQTDRKSTSGYLFKFLGVPISWCSKKQSVVALSTXXXXXXXXXXXXXX 196
            ++  YSDSDW GD  DRKSTSG++F       +W SKKQ +V LST              
Sbjct: 1189 KLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCH 1248

Query: 197  TLWLESLLEELQIQYKKPVQLFVDNKSSISLAKNPIAHGRSKHIETKFHFLRDQVNKARI 376
             +WL +LL+EL +  ++P ++FVDNKS+I+LAKNP+ H RSKHI+T++H++R+ V+K  +
Sbjct: 1249 AIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDV 1308

Query: 377  ELIHCSTDLQAADILTKALKTDRFKVLREMLGL 475
            +L +  T  Q AD  TK LK + F  +R +LG+
Sbjct: 1309 QLEYVKTHDQVADFFTKPLKRENFIKMRSLLGV 1341


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  143 bits (361), Expect = 1e-32
 Identities = 68/153 (44%), Positives = 99/153 (64%)
 Frame = +2

Query: 17   EVTAYSDSDWCGDQTDRKSTSGYLFKFLGVPISWCSKKQSVVALSTXXXXXXXXXXXXXX 196
            ++  YSDSDW GD  DRKSTSG++F       +W SKKQ +V LST              
Sbjct: 1189 KLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCH 1248

Query: 197  TLWLESLLEELQIQYKKPVQLFVDNKSSISLAKNPIAHGRSKHIETKFHFLRDQVNKARI 376
             +WL +LL+EL +  ++P ++FVDNKS+I+LAKNP+ H RSKHI+T++H++R+ V+K  +
Sbjct: 1249 AIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDV 1308

Query: 377  ELIHCSTDLQAADILTKALKTDRFKVLREMLGL 475
            +L +  T  Q AD  TK LK + F  +R +LG+
Sbjct: 1309 QLEYVKTHDQVADFFTKPLKRENFIKMRSLLGV 1341


>ref|XP_003553324.1| PREDICTED: uncharacterized protein LOC100811625 [Glycine max]
          Length = 1135

 Score =  142 bits (358), Expect = 3e-32
 Identities = 70/119 (58%), Positives = 85/119 (71%)
 Frame = +2

Query: 2   EKVIGEVTAYSDSDWCGDQTDRKSTSGYLFKFLGVPISWCSKKQSVVALSTXXXXXXXXX 181
           + + GEV  YSDSDWCGD+ DRKST+GY+FKF   PISWCSKKQSVVALST         
Sbjct: 420 KNIKGEVFGYSDSDWCGDKDDRKSTAGYVFKFGTSPISWCSKKQSVVALSTCEAEYIAVA 479

Query: 182 XXXXXTLWLESLLEELQIQYKKPVQLFVDNKSSISLAKNPIAHGRSKHIETKFHFLRDQ 358
                 LWLE+L+EEL ++    ++L +DNKS+  LAK+ + HGRSKHIE KFHFLRDQ
Sbjct: 480 MAACQALWLEALMEELNLRNCSLMRLLMDNKSANDLAKHLMTHGRSKHIEIKFHFLRDQ 538


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