BLASTX nr result

ID: Glycyrrhiza24_contig00032350 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032350
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541398.1| PREDICTED: pentatricopeptide repeat-containi...   188   3e-46
ref|XP_002308496.1| predicted protein [Populus trichocarpa] gi|2...   166   1e-39
ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   165   4e-39
ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containi...   165   4e-39
ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containi...   163   1e-38

>ref|XP_003541398.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37310-like [Glycine max]
          Length = 667

 Score =  188 bits (478), Expect = 3e-46
 Identities = 96/131 (73%), Positives = 108/131 (82%)
 Frame = -3

Query: 394 YALRTRCDQNVYVATAIVDAYAKLGFIHGAREVFDRSRSRSLIIWTAIISXXXXXXXXXX 215
           YA+R   +QNVYV+T+I+DAY KLG I GAR VFD S+SRSLIIWT+IIS          
Sbjct: 398 YAIRRGYEQNVYVSTSIIDAYGKLGCICGARWVFDLSQSRSLIIWTSIISAYAAHGDAGL 457

Query: 214 XXXXXAQMLDRGIQPDPVTLTSLLTACAHSGLVDEAWDIFNAMPSKYGIQPLVEHYACMV 35
                AQMLD+GI+PDPVTLTS+LTACAHSGLVDEAW+IFN+MPSKYGIQPLVEHYACMV
Sbjct: 458 ALGLYAQMLDKGIRPDPVTLTSVLTACAHSGLVDEAWNIFNSMPSKYGIQPLVEHYACMV 517

Query: 34  GVLSRAGKLSE 2
           GVLSRAGKLSE
Sbjct: 518 GVLSRAGKLSE 528


>ref|XP_002308496.1| predicted protein [Populus trichocarpa] gi|222854472|gb|EEE92019.1|
           predicted protein [Populus trichocarpa]
          Length = 621

 Score =  166 bits (421), Expect = 1e-39
 Identities = 80/131 (61%), Positives = 98/131 (74%)
 Frame = -3

Query: 394 YALRTRCDQNVYVATAIVDAYAKLGFIHGAREVFDRSRSRSLIIWTAIISXXXXXXXXXX 215
           YA++   D+N+YVATAI+D YAKLGF+ GA+ VFD+S+ RSLIIWTAIIS          
Sbjct: 383 YAVKNGYDRNIYVATAIIDTYAKLGFLFGAQYVFDQSKERSLIIWTAIISAHAAHGDANS 442

Query: 214 XXXXXAQMLDRGIQPDPVTLTSLLTACAHSGLVDEAWDIFNAMPSKYGIQPLVEHYACMV 35
                 +ML  GIQPD VT T++L ACAH G+VD+AW+IFN+M  KYGIQPL EHYACMV
Sbjct: 443 ALTFFDEMLSNGIQPDHVTFTAVLAACAHCGMVDKAWEIFNSMSKKYGIQPLGEHYACMV 502

Query: 34  GVLSRAGKLSE 2
           GVL RAG+LS+
Sbjct: 503 GVLGRAGRLSQ 513


>ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g37310-like [Cucumis sativus]
          Length = 635

 Score =  165 bits (417), Expect = 4e-39
 Identities = 80/131 (61%), Positives = 97/131 (74%)
 Frame = -3

Query: 394 YALRTRCDQNVYVATAIVDAYAKLGFIHGAREVFDRSRSRSLIIWTAIISXXXXXXXXXX 215
           YA+R   D+N+YVATAI+D+YAK G++HGA+ VFD+ + RSLI WT+IIS          
Sbjct: 367 YAIRNTYDRNIYVATAIIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAVHGDANV 426

Query: 214 XXXXXAQMLDRGIQPDPVTLTSLLTACAHSGLVDEAWDIFNAMPSKYGIQPLVEHYACMV 35
                 +ML  GIQPD VT TS+L ACAHSG +DEAW IFN +  +YGIQPLVEHYACMV
Sbjct: 427 ALSLFYEMLTNGIQPDQVTFTSVLAACAHSGELDEAWKIFNVLLPEYGIQPLVEHYACMV 486

Query: 34  GVLSRAGKLSE 2
           GVLSRAGKLS+
Sbjct: 487 GVLSRAGKLSD 497


>ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37310-like [Cucumis sativus]
          Length = 595

 Score =  165 bits (417), Expect = 4e-39
 Identities = 80/131 (61%), Positives = 97/131 (74%)
 Frame = -3

Query: 394 YALRTRCDQNVYVATAIVDAYAKLGFIHGAREVFDRSRSRSLIIWTAIISXXXXXXXXXX 215
           YA+R   D+N+YVATAI+D+YAK G++HGA+ VFD+ + RSLI WT+IIS          
Sbjct: 367 YAIRNTYDRNIYVATAIIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAVHGDANV 426

Query: 214 XXXXXAQMLDRGIQPDPVTLTSLLTACAHSGLVDEAWDIFNAMPSKYGIQPLVEHYACMV 35
                 +ML  GIQPD VT TS+L ACAHSG +DEAW IFN +  +YGIQPLVEHYACMV
Sbjct: 427 ALSLFYEMLTNGIQPDQVTFTSVLAACAHSGELDEAWKIFNVLLPEYGIQPLVEHYACMV 486

Query: 34  GVLSRAGKLSE 2
           GVLSRAGKLS+
Sbjct: 487 GVLSRAGKLSD 497


>ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37310-like [Vitis vinifera]
          Length = 667

 Score =  163 bits (413), Expect = 1e-38
 Identities = 81/132 (61%), Positives = 95/132 (71%)
 Frame = -3

Query: 397 AYALRTRCDQNVYVATAIVDAYAKLGFIHGAREVFDRSRSRSLIIWTAIISXXXXXXXXX 218
           AYA+R     N+YVAT+I+DAYAKLGF+ GA+ VFD+S+ RSLI+WTAIIS         
Sbjct: 397 AYAIRNGYAHNIYVATSIIDAYAKLGFLRGAQWVFDQSKDRSLIVWTAIISAYSAHGDAN 456

Query: 217 XXXXXXAQMLDRGIQPDPVTLTSLLTACAHSGLVDEAWDIFNAMPSKYGIQPLVEHYACM 38
                   ML  G QPDPVT T++L ACAHSG+V+EAW IF+ M  KYG QP VEHYACM
Sbjct: 457 AALRLFGDMLSNGTQPDPVTFTAVLAACAHSGMVNEAWKIFDEMFLKYGFQPCVEHYACM 516

Query: 37  VGVLSRAGKLSE 2
           VGVLSRAG LSE
Sbjct: 517 VGVLSRAGMLSE 528


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