BLASTX nr result
ID: Glycyrrhiza24_contig00032344
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00032344 (260 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003599985.1| ATP-dependent DNA helicase PIF1 [Medicago tr... 98 8e-19 ref|XP_003600272.1| Replication protein A 70 kDa DNA-binding sub... 90 2e-16 ref|XP_003600269.1| Replication protein A 70 kDa DNA-binding sub... 90 2e-16 ref|XP_003595510.1| Replication protein A 70 kDa DNA-binding sub... 80 2e-13 gb|AFK36314.1| unknown [Lotus japonicus] 79 5e-13 >ref|XP_003599985.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula] gi|355489033|gb|AES70236.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula] Length = 537 Score = 97.8 bits (242), Expect = 8e-19 Identities = 42/72 (58%), Positives = 62/72 (86%) Frame = -2 Query: 217 MALVFTPISEITGGKDSWSILAKVVRLWVVSDLSKHKIPFSIEMVLIDEQGSKIHATVKR 38 MAL F PIS+I+ K +W+I A+VVRLW VSD +++ +PFSIEMVL+D +GS+IHA++K+ Sbjct: 1 MALTFEPISQISSSKPAWNIKARVVRLWKVSDFNRNTLPFSIEMVLMDSEGSRIHASIKK 60 Query: 37 TLVYKFQNQLKE 2 TL+YKFQ++++E Sbjct: 61 TLLYKFQSEIRE 72 >ref|XP_003600272.1| Replication protein A 70 kDa DNA-binding subunit [Medicago truncatula] gi|355489320|gb|AES70523.1| Replication protein A 70 kDa DNA-binding subunit [Medicago truncatula] Length = 701 Score = 90.1 bits (222), Expect = 2e-16 Identities = 40/72 (55%), Positives = 60/72 (83%) Frame = -2 Query: 217 MALVFTPISEITGGKDSWSILAKVVRLWVVSDLSKHKIPFSIEMVLIDEQGSKIHATVKR 38 MAL F PIS+I+ K + +I A+VVRLW +SD +++ +PFSIEMVL+D +GS+IHA++K+ Sbjct: 1 MALTFEPISQISSSKPAGNIKARVVRLWKLSDFNRNTLPFSIEMVLMDSEGSRIHASIKK 60 Query: 37 TLVYKFQNQLKE 2 TL YKFQ++++E Sbjct: 61 TLWYKFQSEIRE 72 >ref|XP_003600269.1| Replication protein A 70 kDa DNA-binding subunit [Medicago truncatula] gi|355489317|gb|AES70520.1| Replication protein A 70 kDa DNA-binding subunit [Medicago truncatula] Length = 323 Score = 90.1 bits (222), Expect = 2e-16 Identities = 40/72 (55%), Positives = 60/72 (83%) Frame = -2 Query: 217 MALVFTPISEITGGKDSWSILAKVVRLWVVSDLSKHKIPFSIEMVLIDEQGSKIHATVKR 38 MAL F PIS+I+ K + +I A+VVRLW +SD +++ +PFSIEMVL+D +GS+IHA++K+ Sbjct: 1 MALTFEPISQISSSKPAGNIKARVVRLWKLSDFNRNTLPFSIEMVLMDSEGSRIHASIKK 60 Query: 37 TLVYKFQNQLKE 2 TL YKFQ++++E Sbjct: 61 TLWYKFQSEIRE 72 >ref|XP_003595510.1| Replication protein A 70 kDa DNA-binding subunit [Medicago truncatula] gi|355484558|gb|AES65761.1| Replication protein A 70 kDa DNA-binding subunit [Medicago truncatula] Length = 549 Score = 79.7 bits (195), Expect = 2e-13 Identities = 32/65 (49%), Positives = 54/65 (83%) Frame = -2 Query: 196 ISEITGGKDSWSILAKVVRLWVVSDLSKHKIPFSIEMVLIDEQGSKIHATVKRTLVYKFQ 17 IS+I+ K++W+I +VVRLW V D+ K ++P+S+EMVL+D +G +I+A+V+RTL+YK++ Sbjct: 8 ISDISPSKENWNIRVRVVRLWFVRDMKKDQLPYSLEMVLMDNKGDRINASVRRTLIYKYE 67 Query: 16 NQLKE 2 +L+E Sbjct: 68 KELRE 72 >gb|AFK36314.1| unknown [Lotus japonicus] Length = 242 Score = 78.6 bits (192), Expect = 5e-13 Identities = 35/72 (48%), Positives = 52/72 (72%) Frame = -2 Query: 217 MALVFTPISEITGGKDSWSILAKVVRLWVVSDLSKHKIPFSIEMVLIDEQGSKIHATVKR 38 MA+ +S++ KD+W+I+ KVVRLWV S K+PFS+E+VL+D +G +IHA+V++ Sbjct: 1 MAIKVDDVSDVNNSKDTWNIVTKVVRLWVSPSFSGGKLPFSMELVLMDSKGCQIHASVRK 60 Query: 37 TLVYKFQNQLKE 2 TLVY+F L E Sbjct: 61 TLVYRFHPLLTE 72