BLASTX nr result

ID: Glycyrrhiza24_contig00032342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032342
         (224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003589591.1| Replication factor C large subunit [Medicago...   120   2e-25
ref|XP_003527935.1| PREDICTED: uncharacterized protein LOC100784...   116   2e-24
ref|XP_003522579.1| PREDICTED: uncharacterized protein LOC100784...    97   1e-18
ref|XP_002513798.1| hypothetical protein RCOM_1032100 [Ricinus c...    91   1e-16
emb|CAN67425.1| hypothetical protein VITISV_006652 [Vitis vinifera]    90   2e-16

>ref|XP_003589591.1| Replication factor C large subunit [Medicago truncatula]
           gi|355478639|gb|AES59842.1| Replication factor C large
           subunit [Medicago truncatula]
          Length = 1178

 Score =  120 bits (300), Expect = 2e-25
 Identities = 57/71 (80%), Positives = 64/71 (90%)
 Frame = -2

Query: 217 CDHISKDINEEGSLQNVLLITGPVGSGKSAAVYACAREQGFEVLELNASDCRNGAAVKHY 38
           CD+ SKD++EEGSL+NVLLITGPVGSGKSAAVYACA+EQGFEVLELN SDCRN  AVK Y
Sbjct: 339 CDYASKDVSEEGSLKNVLLITGPVGSGKSAAVYACAQEQGFEVLELNTSDCRNATAVKQY 398

Query: 37  LGDALGSRGLK 5
            GDALGS+ +K
Sbjct: 399 FGDALGSQCVK 409


>ref|XP_003527935.1| PREDICTED: uncharacterized protein LOC100784968 [Glycine max]
          Length = 1197

 Score =  116 bits (291), Expect = 2e-24
 Identities = 56/71 (78%), Positives = 62/71 (87%)
 Frame = -2

Query: 214 DHISKDINEEGSLQNVLLITGPVGSGKSAAVYACAREQGFEVLELNASDCRNGAAVKHYL 35
           D+ S+DINEE SLQNVLLITGP+GSGKSAAVYACA EQ FE+LELNASDCRNG AV++Y 
Sbjct: 385 DYDSEDINEEDSLQNVLLITGPIGSGKSAAVYACAEEQRFEILELNASDCRNGTAVRNYF 444

Query: 34  GDALGSRGLKR 2
           GD LGS G KR
Sbjct: 445 GDTLGSLGFKR 455


>ref|XP_003522579.1| PREDICTED: uncharacterized protein LOC100784209 [Glycine max]
          Length = 1199

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 50/71 (70%), Positives = 55/71 (77%)
 Frame = -2

Query: 214 DHISKDINEEGSLQNVLLITGPVGSGKSAAVYACAREQGFEVLELNASDCRNGAAVKHYL 35
           D+ S+DINEE SLQN         SGKSAAVYACA EQGFE+LELNASDCRNG AV++Y 
Sbjct: 389 DYDSEDINEEDSLQN---------SGKSAAVYACAEEQGFEILELNASDCRNGTAVRNYF 439

Query: 34  GDALGSRGLKR 2
           GDALGS G KR
Sbjct: 440 GDALGSLGFKR 450


>ref|XP_002513798.1| hypothetical protein RCOM_1032100 [Ricinus communis]
           gi|223546884|gb|EEF48381.1| hypothetical protein
           RCOM_1032100 [Ricinus communis]
          Length = 1247

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 43/61 (70%), Positives = 52/61 (85%)
 Frame = -2

Query: 214 DHISKDINEEGSLQNVLLITGPVGSGKSAAVYACAREQGFEVLELNASDCRNGAAVKHYL 35
           D  S++I+EEGS +NVLLITGPVGSGKSAA+YACA+EQGF VLE +AS+CRNGA +K   
Sbjct: 405 DSDSENISEEGSFKNVLLITGPVGSGKSAAIYACAKEQGFRVLEASASECRNGALMKERF 464

Query: 34  G 32
           G
Sbjct: 465 G 465


>emb|CAN67425.1| hypothetical protein VITISV_006652 [Vitis vinifera]
          Length = 1170

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 44/74 (59%), Positives = 56/74 (75%)
 Frame = -2

Query: 223 SDCDHISKDINEEGSLQNVLLITGPVGSGKSAAVYACAREQGFEVLELNASDCRNGAAVK 44
           SD D    D++E   L+NVLL+TGPVGSGKSAA+YACA+EQGF ++E+N S  R+G  VK
Sbjct: 320 SDSD---SDLDEGTGLKNVLLVTGPVGSGKSAAIYACAKEQGFRIIEINTSGLRSGTVVK 376

Query: 43  HYLGDALGSRGLKR 2
             +G+AL S GLKR
Sbjct: 377 QRIGEALESHGLKR 390


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