BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032335
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526239.1| PREDICTED: pentatricopeptide repeat-containi...   182   3e-44
ref|XP_002276142.2| PREDICTED: pentatricopeptide repeat-containi...   135   3e-30
emb|CAN82291.1| hypothetical protein VITISV_021279 [Vitis vinifera]   130   1e-28
ref|XP_002326026.1| predicted protein [Populus trichocarpa] gi|2...   124   8e-27
ref|XP_002876469.1| pentatricopeptide repeat-containing protein ...   115   5e-24

>ref|XP_003526239.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g58590-like [Glycine max]
          Length = 732

 Score =  182 bits (461), Expect = 3e-44
 Identities = 90/124 (72%), Positives = 104/124 (83%)
 Frame = -3

Query: 376 EAFCVFEDMPHKSLVTWNSMLSLLACNNEFVEESKVLFRDLLGSGIPLSEGSFVGILSGL 197
           E F  FEDMP KSLVTWNSM+SLLA  N FVEE K+LFRDL+G+GI LSEGS V +LSGL
Sbjct: 166 ELFLAFEDMPQKSLVTWNSMVSLLA-RNGFVEECKILFRDLVGTGISLSEGSVVAVLSGL 224

Query: 196 GGSQEDLKYGEQVHCLMTKCGFDCELTAVNSLISVYVRCKAVVSAERLLEQVPVQDVVSW 17
             S+EDL+YGEQ+H LM KCGF CE+TA NSLISVYVRCKA+ + ERL EQVPV++VVSW
Sbjct: 225 VDSEEDLEYGEQIHGLMVKCGFGCEITAANSLISVYVRCKAMFAVERLFEQVPVENVVSW 284

Query: 16  NTMI 5
           NT+I
Sbjct: 285 NTVI 288



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/121 (26%), Positives = 68/121 (56%)
 Frame = -3

Query: 364 VFEDMPHKSLVTWNSMLSLLACNNEFVEESKVLFRDLLGSGIPLSEGSFVGILSGLGGSQ 185
           +FE +P +++V+WN+++  L   +E    +  LF ++   G+  S+ +FV ++      +
Sbjct: 272 LFEQVPVENVVSWNTVIDALV-KSERPMMALDLFLNMARRGLMPSQATFVAVIHSCTSLR 330

Query: 184 EDLKYGEQVHCLMTKCGFDCELTAVNSLISVYVRCKAVVSAERLLEQVPVQDVVSWNTMI 5
             +  GE VH  + + GF+ ++    +L+  Y +C   +SA +  +Q+  ++VVSWN +I
Sbjct: 331 NSV-CGESVHAKIIRSGFESDVIVGTALVDFYSKCDKFISAHKCFDQIEEKNVVSWNALI 389

Query: 4   S 2
           +
Sbjct: 390 T 390


>ref|XP_002276142.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g58590-like [Vitis vinifera]
          Length = 921

 Score =  135 bits (340), Expect = 3e-30
 Identities = 68/124 (54%), Positives = 92/124 (74%)
 Frame = -3

Query: 376 EAFCVFEDMPHKSLVTWNSMLSLLACNNEFVEESKVLFRDLLGSGIPLSEGSFVGILSGL 197
           E  C FE+MP K+LVTWN+++SL   N  F EES  LFR+L+ +G  LSE SF+G+LSG 
Sbjct: 206 EVVCAFEEMPQKNLVTWNTVISLFG-NYGFSEESMFLFRELMRTGAGLSECSFMGVLSGF 264

Query: 196 GGSQEDLKYGEQVHCLMTKCGFDCELTAVNSLISVYVRCKAVVSAERLLEQVPVQDVVSW 17
             S++DL+ GEQVH L+ K GFDCE++ +NSLI++YV+C  +  AE++ E   V+DVVSW
Sbjct: 265 A-SEQDLELGEQVHDLLIKNGFDCEVSVLNSLINMYVKCSCICLAEKMFELGCVRDVVSW 323

Query: 16  NTMI 5
           NTMI
Sbjct: 324 NTMI 327


>emb|CAN82291.1| hypothetical protein VITISV_021279 [Vitis vinifera]
          Length = 954

 Score =  130 bits (327), Expect = 1e-28
 Identities = 67/124 (54%), Positives = 91/124 (73%)
 Frame = -3

Query: 376 EAFCVFEDMPHKSLVTWNSMLSLLACNNEFVEESKVLFRDLLGSGIPLSEGSFVGILSGL 197
           E  C FE+MP K+LVTWN+++SL   N  F EES  LFR+L+ +G  LSE SF+G+LSG 
Sbjct: 206 EVVCAFEEMPLKNLVTWNTVISLFG-NYGFSEESMFLFRELMRTGAGLSECSFMGVLSGF 264

Query: 196 GGSQEDLKYGEQVHCLMTKCGFDCELTAVNSLISVYVRCKAVVSAERLLEQVPVQDVVSW 17
             S++DL+ GEQVH L+ K GFD E++ +NSLI++YV+C  +  AE++ E   V+DVVSW
Sbjct: 265 A-SEQDLELGEQVHDLLIKNGFDXEVSVLNSLINMYVKCSCIXLAEKMFELGCVRDVVSW 323

Query: 16  NTMI 5
           NTMI
Sbjct: 324 NTMI 327


>ref|XP_002326026.1| predicted protein [Populus trichocarpa] gi|222862901|gb|EEF00408.1|
           predicted protein [Populus trichocarpa]
          Length = 737

 Score =  124 bits (311), Expect = 8e-27
 Identities = 68/125 (54%), Positives = 90/125 (72%)
 Frame = -3

Query: 376 EAFCVFEDMPHKSLVTWNSMLSLLACNNEFVEESKVLFRDLLGSGIPLSEGSFVGILSGL 197
           EAF VFEDMP KSLVTWNSM+SLL  ++ FVE+  VLFR L+     LS+ SF G+LSGL
Sbjct: 166 EAFHVFEDMPDKSLVTWNSMISLLG-HHGFVEDCVVLFRKLVRKEGSLSKCSFEGVLSGL 224

Query: 196 GGSQEDLKYGEQVHCLMTKCGFDCELTAVNSLISVYVRCKAVVSAERLLEQVPVQDVVSW 17
              +EDL++G Q+H L+ K G DCE+   NSLI++Y R  ++   E+L E+V  +DVV+W
Sbjct: 225 V-CEEDLEFGGQIHGLVIKSGLDCEVLVSNSLINMYARRSSMSQVEKLFEEVDGRDVVTW 283

Query: 16  NTMIS 2
           NT+IS
Sbjct: 284 NTIIS 288


>ref|XP_002876469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297322307|gb|EFH52728.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 741

 Score =  115 bits (287), Expect = 5e-24
 Identities = 58/120 (48%), Positives = 81/120 (67%)
 Frame = -3

Query: 364 VFEDMPHKSLVTWNSMLSLLACNNEFVEESKVLFRDLLGSGIPLSEGSFVGILSGLGGSQ 185
           VFEDMP KSL TWN M+SLL  ++ F++E   LFR+L+G G  L+E S +G+L G+   +
Sbjct: 171 VFEDMPFKSLETWNHMMSLLG-HHGFLKECMFLFRELVGMGACLTESSLLGVLKGVS-CE 228

Query: 184 EDLKYGEQVHCLMTKCGFDCELTAVNSLISVYVRCKAVVSAERLLEQVPVQDVVSWNTMI 5
            DL+  +Q+HC  TK G DCE++ VNSLIS Y +C     AER+ ++    D+VSWN +I
Sbjct: 229 NDLEISKQLHCSATKQGLDCEISVVNSLISAYGKCGNTHMAERMFQEAGSWDIVSWNAII 288