BLASTX nr result

ID: Glycyrrhiza24_contig00032327 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032327
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588264.1| hypothetical protein MTR_1g005050 [Medicago ...   137   9e-31
ref|YP_173420.1| hypothetical protein NitaMp078 [Nicotiana tabac...    79   3e-13
emb|CAN71465.1| hypothetical protein VITISV_038986 [Vitis vinifera]    79   5e-13
emb|CBI35735.3| unnamed protein product [Vitis vinifera]               78   6e-13
ref|XP_002534684.1| conserved hypothetical protein [Ricinus comm...    69   5e-10

>ref|XP_003588264.1| hypothetical protein MTR_1g005050 [Medicago truncatula]
           gi|355477312|gb|AES58515.1| hypothetical protein
           MTR_1g005050 [Medicago truncatula]
          Length = 334

 Score =  137 bits (345), Expect = 9e-31
 Identities = 77/109 (70%), Positives = 78/109 (71%)
 Frame = -1

Query: 343 R*VPYRDNRHSQRILRAPGIPLLPSVRLSRGGNRTTGKDPADLPRARGRALFKREWGVNR 164
           R VPYR NRHSQRILRAPGIPL PSVRLSRGGNRTTGKDPADLP+ARGR           
Sbjct: 41  RKVPYRYNRHSQRILRAPGIPL-PSVRLSRGGNRTTGKDPADLPKARGR----------- 88

Query: 163 KASVFVLGFLASRSYS*LGRGKESKSMDINEPSLMDVAHDTINSTQGPA 17
                            LGRGKESKSMDINEPSLMDVAHDTINSTQGPA
Sbjct: 89  -----------------LGRGKESKSMDINEPSLMDVAHDTINSTQGPA 120


>ref|YP_173420.1| hypothetical protein NitaMp078 [Nicotiana tabacum]
           gi|56806583|dbj|BAD83484.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 122

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 45/54 (83%), Positives = 47/54 (87%), Gaps = 2/54 (3%)
 Frame = -1

Query: 157 SVFVLGFLA--SRSYS*LGRGKESKSMDINEPSLMDVAHDTINSTQGPALIEVA 2
           SV VL  L+  SRS+S L RGKESKSMDINEPSLMDVAHDTINSTQGPALIEVA
Sbjct: 7   SVSVLWGLSGPSRSFSTLRRGKESKSMDINEPSLMDVAHDTINSTQGPALIEVA 60


>emb|CAN71465.1| hypothetical protein VITISV_038986 [Vitis vinifera]
          Length = 564

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 41/51 (80%), Positives = 43/51 (84%), Gaps = 1/51 (1%)
 Frame = +3

Query: 99  FPLPN-YE*DREAKKPRTKTEAFRFTPHSLLNKARPRALGRSAGSFPVVLF 248
           FP  N  E   +A KPRT+TEAFRFTPHSLLNKARPRALGRSAGSFPVVLF
Sbjct: 38  FPTTNKIERGPKAPKPRTETEAFRFTPHSLLNKARPRALGRSAGSFPVVLF 88


>emb|CBI35735.3| unnamed protein product [Vitis vinifera]
          Length = 234

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 40/51 (78%), Positives = 43/51 (84%), Gaps = 1/51 (1%)
 Frame = +3

Query: 99  FPLPN-YE*DREAKKPRTKTEAFRFTPHSLLNKARPRALGRSAGSFPVVLF 248
           FP  N  E   +A KPRT+TEAFRFTPHSLLNKARPRALGRSAGSFP+VLF
Sbjct: 7   FPTTNKIERGPKAPKPRTETEAFRFTPHSLLNKARPRALGRSAGSFPIVLF 57



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 41/87 (47%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
 Frame = +1

Query: 94  TPSPFPTTNKIERPKNQERKRKPFDSLPIL--S*IKLALEPWAGRPGLS---LLFCSRHE 258
           TPSPFPTTNKIER     + R   ++      S +  A     GR   S   +LF  R  
Sbjct: 3   TPSPFPTTNKIERGPKAPKPRTETEAFRFTPHSLLNKARPRALGRSAGSFPIVLFPPRE- 61

Query: 259 KDAQKEEEVCPARGGSVESVCCLGREL 339
              ++ EEVCPARGGSVES CCL REL
Sbjct: 62  ---RRTEEVCPARGGSVESFCCLSREL 85


>ref|XP_002534684.1| conserved hypothetical protein [Ricinus communis]
           gi|223524768|gb|EEF27698.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 261

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 33/41 (80%), Positives = 37/41 (90%)
 Frame = +3

Query: 126 REAKKPRTKTEAFRFTPHSLLNKARPRALGRSAGSFPVVLF 248
           ++A KPRT+TEAF FTPHSLLNKARPRALGRSAGSF  +LF
Sbjct: 31  KKAPKPRTETEAFLFTPHSLLNKARPRALGRSAGSFLSLLF 71


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