BLASTX nr result

ID: Glycyrrhiza24_contig00032326 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032326
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539241.1| PREDICTED: LOW QUALITY PROTEIN: integrator c...   235   3e-60
ref|XP_003598666.1| Integrator complex subunit [Medicago truncat...   169   3e-40
ref|NP_187409.2| integrator complex subunit 9 [Arabidopsis thali...   151   5e-35
ref|XP_002882534.1| hypothetical protein ARALYDRAFT_896920 [Arab...   149   2e-34
ref|XP_002265081.2| PREDICTED: integrator complex subunit 9 homo...   146   2e-33

>ref|XP_003539241.1| PREDICTED: LOW QUALITY PROTEIN: integrator complex subunit 9-like
           [Glycine max]
          Length = 794

 Score =  235 bits (599), Expect = 3e-60
 Identities = 114/129 (88%), Positives = 117/129 (90%)
 Frame = -2

Query: 387 FHFPPCHMLNFCGTRILLDCPLDLSAIMAFSPVPTALDALPFEESNNTEANAFLSSKAGS 208
           FHFPPCHMLNFCG RILLDCPLDLSA+MAFSPVPTALD LP EES NTEANAF  S+ GS
Sbjct: 99  FHFPPCHMLNFCGIRILLDCPLDLSALMAFSPVPTALDCLPVEESYNTEANAFFDSRFGS 158

Query: 207 EKRQKIEKLLDAKSLLFAEPWYKTVTNLHLWNASLIDVILISSPMGIMGLPFLTRMKGFS 28
            KRQKIE LLDAKSLLFAEPWYKTV NLHLWNAS IDV+LISSPMGIMGLPFLTR KGFS
Sbjct: 159 GKRQKIENLLDAKSLLFAEPWYKTVNNLHLWNASFIDVVLISSPMGIMGLPFLTRTKGFS 218

Query: 27  AKIYVTEAS 1
           AKIYVTEAS
Sbjct: 219 AKIYVTEAS 227


>ref|XP_003598666.1| Integrator complex subunit [Medicago truncatula]
           gi|355487714|gb|AES68917.1| Integrator complex subunit
           [Medicago truncatula]
          Length = 268

 Score =  169 bits (427), Expect = 3e-40
 Identities = 86/129 (66%), Positives = 92/129 (71%)
 Frame = -2

Query: 387 FHFPPCHMLNFCGTRILLDCPLDLSAIMAFSPVPTALDALPFEESNNTEANAFLSSKAGS 208
           FHFPPCHMLNFCG RIL DCPLDLS++M                               +
Sbjct: 105 FHFPPCHMLNFCGVRILFDCPLDLSSLM------------------------------NN 134

Query: 207 EKRQKIEKLLDAKSLLFAEPWYKTVTNLHLWNASLIDVILISSPMGIMGLPFLTRMKGFS 28
           EKRQKIE LLDAK+L+FAEPWYKTV  LHLWNASLIDVILISSPMGIMGLP+LTR KGFS
Sbjct: 135 EKRQKIEDLLDAKNLVFAEPWYKTVNKLHLWNASLIDVILISSPMGIMGLPYLTRQKGFS 194

Query: 27  AKIYVTEAS 1
           AKIYVTEAS
Sbjct: 195 AKIYVTEAS 203


>ref|NP_187409.2| integrator complex subunit 9 [Arabidopsis thaliana]
           gi|332641036|gb|AEE74557.1| integrator complex subunit 9
           [Arabidopsis thaliana]
          Length = 699

 Score =  151 bits (382), Expect = 5e-35
 Identities = 71/129 (55%), Positives = 95/129 (73%)
 Frame = -2

Query: 387 FHFPPCHMLNFCGTRILLDCPLDLSAIMAFSPVPTALDALPFEESNNTEANAFLSSKAGS 208
           FH+PPCHMLN CG RIL+DCPLDLSAI  FSPVP+ + +    E++   ++  L ++   
Sbjct: 12  FHYPPCHMLNLCGFRILIDCPLDLSAIKIFSPVPSGVGS----EASEYLSDESLDAQNPI 67

Query: 207 EKRQKIEKLLDAKSLLFAEPWYKTVTNLHLWNASLIDVILISSPMGIMGLPFLTRMKGFS 28
           +K+QK+E+ L    L+  EPWYKTV  LHLW AS ID++LIS+PMG++GLPFLT+  GF 
Sbjct: 68  QKKQKLERQLTCADLVCEEPWYKTVKALHLWEASFIDIVLISNPMGLLGLPFLTQNPGFF 127

Query: 27  AKIYVTEAS 1
           AKIY+TE +
Sbjct: 128 AKIYMTEVT 136


>ref|XP_002882534.1| hypothetical protein ARALYDRAFT_896920 [Arabidopsis lyrata subsp.
           lyrata] gi|297328374|gb|EFH58793.1| hypothetical protein
           ARALYDRAFT_896920 [Arabidopsis lyrata subsp. lyrata]
          Length = 699

 Score =  149 bits (377), Expect = 2e-34
 Identities = 71/129 (55%), Positives = 96/129 (74%)
 Frame = -2

Query: 387 FHFPPCHMLNFCGTRILLDCPLDLSAIMAFSPVPTALDALPFEESNNTEANAFLSSKAGS 208
           FH+PPCHMLN CG RIL+DCPLDLSAI  FSPV + + +    E++   ++  L ++   
Sbjct: 12  FHYPPCHMLNLCGFRILIDCPLDLSAIKIFSPVISCVAS----EASKYPSDESLDAQNPI 67

Query: 207 EKRQKIEKLLDAKSLLFAEPWYKTVTNLHLWNASLIDVILISSPMGIMGLPFLTRMKGFS 28
           +K+ K+E+ L    L+  EPWYKTV  LHLW+AS ID++LIS+PMG++GLPFLT+  GFS
Sbjct: 68  QKKHKLERQLTFADLVCEEPWYKTVKPLHLWDASFIDIVLISNPMGLLGLPFLTQNPGFS 127

Query: 27  AKIYVTEAS 1
           AKIY+TEA+
Sbjct: 128 AKIYMTEAT 136


>ref|XP_002265081.2| PREDICTED: integrator complex subunit 9 homolog [Vitis vinifera]
           gi|296081277|emb|CBI17721.3| unnamed protein product
           [Vitis vinifera]
          Length = 774

 Score =  146 bits (368), Expect = 2e-33
 Identities = 70/129 (54%), Positives = 92/129 (71%)
 Frame = -2

Query: 387 FHFPPCHMLNFCGTRILLDCPLDLSAIMAFSPVPTALDALPFEESNNTEANAFLSSKAGS 208
           F+FPPCH++   G RILLDCPLDLS++M FSP+PT   + P             S  +  
Sbjct: 93  FYFPPCHIITVSGFRILLDCPLDLSSLMIFSPIPTHAFSNP----------ELPSPDSVD 142

Query: 207 EKRQKIEKLLDAKSLLFAEPWYKTVTNLHLWNASLIDVILISSPMGIMGLPFLTRMKGFS 28
           +KRQK E+ +D+  L+ A+PW+KTVT+LHLWN   IDV+LISSPMG++GLPFL+R+ GF 
Sbjct: 143 QKRQKHERPIDSSELIRAQPWFKTVTSLHLWNVPFIDVVLISSPMGMLGLPFLSRVNGFR 202

Query: 27  AKIYVTEAS 1
           AKIYVTE +
Sbjct: 203 AKIYVTEVT 211


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