BLASTX nr result

ID: Glycyrrhiza24_contig00032316 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032316
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518314.1| PREDICTED: protein CHUP1, chloroplastic-like...    88   3e-31
ref|XP_003544301.1| PREDICTED: protein CHUP1, chloroplastic-like...    90   2e-29
ref|XP_003615748.1| Protein CHUP1 [Medicago truncatula] gi|35551...    82   1e-25
ref|XP_003539347.1| PREDICTED: protein CHUP1, chloroplastic-like...    87   1e-15
ref|XP_003539335.1| PREDICTED: protein CHUP1, chloroplastic-like...    87   2e-15

>ref|XP_003518314.1| PREDICTED: protein CHUP1, chloroplastic-like [Glycine max]
          Length = 460

 Score = 87.8 bits (216), Expect(2) = 3e-31
 Identities = 44/52 (84%), Positives = 48/52 (92%)
 Frame = -1

Query: 340 LDTGLIGQMKLSSLRLAKEFMERITKELGSSEALQEDNLLVQGVKFAFRVHQ 185
           LD G+IGQMKLSSLRLAKEFM+R+TKEL S+E LQEDNL VQGVKFAFRVHQ
Sbjct: 354 LDIGIIGQMKLSSLRLAKEFMKRMTKELVSNELLQEDNLFVQGVKFAFRVHQ 405



 Score = 72.4 bits (176), Expect(2) = 3e-31
 Identities = 33/40 (82%), Positives = 34/40 (85%)
 Frame = -3

Query: 185 GGFDPETTQTFQELKRIGCAIPSYSNLINCSKLVKICQKP 66
           GGFD ET Q FQELK+IGCAIPSYSNLI C KLVK CQKP
Sbjct: 408 GGFDLETIQAFQELKKIGCAIPSYSNLIKCPKLVKTCQKP 447


>ref|XP_003544301.1| PREDICTED: protein CHUP1, chloroplastic-like [Glycine max]
          Length = 449

 Score = 89.7 bits (221), Expect(2) = 2e-29
 Identities = 44/52 (84%), Positives = 49/52 (94%)
 Frame = -1

Query: 340 LDTGLIGQMKLSSLRLAKEFMERITKELGSSEALQEDNLLVQGVKFAFRVHQ 185
           LDTG+IGQMKLSSL++AKEFM+RITKEL S+E LQEDNL VQGVKFAFRVHQ
Sbjct: 354 LDTGIIGQMKLSSLKMAKEFMKRITKELESNELLQEDNLFVQGVKFAFRVHQ 405



 Score = 64.7 bits (156), Expect(2) = 2e-29
 Identities = 30/42 (71%), Positives = 33/42 (78%)
 Frame = -3

Query: 185 GGFDPETTQTFQELKRIGCAIPSYSNLINCSKLVKICQKPAS 60
           GGFD ET + F+ELK+IGCAIPSYSNLI    LVK CQKP S
Sbjct: 408 GGFDTETIEAFEELKKIGCAIPSYSNLIKFPILVKTCQKPIS 449


>ref|XP_003615748.1| Protein CHUP1 [Medicago truncatula] gi|355517083|gb|AES98706.1|
           Protein CHUP1 [Medicago truncatula]
          Length = 461

 Score = 81.6 bits (200), Expect(2) = 1e-25
 Identities = 42/54 (77%), Positives = 48/54 (88%), Gaps = 2/54 (3%)
 Frame = -1

Query: 340 LDTGLIGQMKLSSLRLAKEFMERITKELGSSEALQED--NLLVQGVKFAFRVHQ 185
           +DTGL+GQ+KL SLRLAKEFM+RITKE+ S EAL ED  NLL+QGVKFAFRVHQ
Sbjct: 363 MDTGLVGQIKLCSLRLAKEFMKRITKEIKSHEALHEDNNNLLLQGVKFAFRVHQ 416



 Score = 60.1 bits (144), Expect(2) = 1e-25
 Identities = 29/43 (67%), Positives = 34/43 (79%), Gaps = 1/43 (2%)
 Frame = -3

Query: 185 GGFDPETTQTFQELKRIGCAIPSYSNL-INCSKLVKICQKPAS 60
           GGFDP+TTQTF ELK++GCA+PS SNL IN  K VK+C K  S
Sbjct: 419 GGFDPDTTQTFLELKKVGCAVPSNSNLIINPLKHVKVCHKHVS 461


>ref|XP_003539347.1| PREDICTED: protein CHUP1, chloroplastic-like [Glycine max]
          Length = 474

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 42/52 (80%), Positives = 50/52 (96%)
 Frame = -1

Query: 340 LDTGLIGQMKLSSLRLAKEFMERITKELGSSEALQEDNLLVQGVKFAFRVHQ 185
           LDTGLIGQMKLSSL+L++EFM+R+TKEL S+EA +EDNLLVQGV+FAFRVHQ
Sbjct: 397 LDTGLIGQMKLSSLKLSREFMKRVTKELESNEASKEDNLLVQGVRFAFRVHQ 448


>ref|XP_003539335.1| PREDICTED: protein CHUP1, chloroplastic-like [Glycine max]
          Length = 494

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 42/52 (80%), Positives = 49/52 (94%)
 Frame = -1

Query: 340 LDTGLIGQMKLSSLRLAKEFMERITKELGSSEALQEDNLLVQGVKFAFRVHQ 185
           LDTGLIGQMKLSSL+LA+EFM+R+TKEL S+E  +EDNLLVQGV+FAFRVHQ
Sbjct: 397 LDTGLIGQMKLSSLKLAREFMKRVTKELESNEVSKEDNLLVQGVRFAFRVHQ 448


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