BLASTX nr result

ID: Glycyrrhiza24_contig00032308 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032308
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521909.1| PREDICTED: tRNA-specific adenosine deaminase...   137   7e-31
ref|XP_003618981.1| Double-stranded RNA-specific adenosine deami...   134   1e-29
ref|XP_003529951.1| PREDICTED: tRNA-specific adenosine deaminase...    86   4e-15
ref|XP_002511834.1| protein with unknown function [Ricinus commu...    78   9e-13
ref|XP_002273023.1| PREDICTED: tRNA-specific adenosine deaminase...    77   2e-12

>ref|XP_003521909.1| PREDICTED: tRNA-specific adenosine deaminase 1-like [Glycine max]
          Length = 407

 Score =  137 bits (346), Expect = 7e-31
 Identities = 67/87 (77%), Positives = 74/87 (85%)
 Frame = -3

Query: 262 LMRFFYTQIQYLTETRNKHAPSNGGKRFKVDDDNLALELDPGCLNKGKYTLRRGWKLHMY 83
           L+RFFYTQIQ+LT +  KHAPSNGGKRFK+DD N   ELDPGCLNKGKY+L++ WKLHMY
Sbjct: 91  LIRFFYTQIQHLTGS--KHAPSNGGKRFKLDDGNSPFELDPGCLNKGKYSLKKDWKLHMY 148

Query: 82  ISQLPCGHASLSSLVSPLETVPLGESD 2
           ISQLPCG ASLS  VSPLET  LGESD
Sbjct: 149 ISQLPCGDASLSWQVSPLETAVLGESD 175


>ref|XP_003618981.1| Double-stranded RNA-specific adenosine deaminase [Medicago
           truncatula] gi|355493996|gb|AES75199.1| Double-stranded
           RNA-specific adenosine deaminase [Medicago truncatula]
          Length = 413

 Score =  134 bits (336), Expect = 1e-29
 Identities = 67/93 (72%), Positives = 76/93 (81%), Gaps = 7/93 (7%)
 Frame = -3

Query: 262 LMRFFYTQIQYLTETRNKHAPSNGGKRFKVDDDNLALELDPGCLNKGKYTLRRGWKLHMY 83
           L+RFFYTQIQ L+E  +K APSNG KRFKVDD+NLA E+D GCL+K KYTLR GWKLHMY
Sbjct: 89  LIRFFYTQIQRLSEPSSKSAPSNGAKRFKVDDNNLAFEVDEGCLDKRKYTLRSGWKLHMY 148

Query: 82  ISQLPC-------GHASLSSLVSPLETVPLGES 5
           ISQLPC       G ASLSSLV+PLE+VPLGE+
Sbjct: 149 ISQLPCNLIPHFRGDASLSSLVTPLESVPLGEN 181


>ref|XP_003529951.1| PREDICTED: tRNA-specific adenosine deaminase 1-like [Glycine max]
          Length = 384

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 48/87 (55%), Positives = 54/87 (62%)
 Frame = -3

Query: 262 LMRFFYTQIQYLTETRNKHAPSNGGKRFKVDDDNLALELDPGCLNKGKYTLRRGWKLHMY 83
           LMRFFYTQIQ+LTE+ +KHAP NGGKRFK+D+D+L  E DPG                  
Sbjct: 91  LMRFFYTQIQHLTESSSKHAPGNGGKRFKLDEDHLPFEWDPG------------------ 132

Query: 82  ISQLPCGHASLSSLVSPLETVPLGESD 2
                 G ASLS  VSPLETV LGESD
Sbjct: 133 ------GDASLSFHVSPLETVVLGESD 153


>ref|XP_002511834.1| protein with unknown function [Ricinus communis]
           gi|223549014|gb|EEF50503.1| protein with unknown
           function [Ricinus communis]
          Length = 443

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 39/74 (52%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
 Frame = -3

Query: 262 LMRFFYTQIQYLTETRNKHAPSNGGKRFKVDD-DNLALELDPGCLNKGKYTLRRGWKLHM 86
           LMRFFY++I+ LT+T NKH    G ++F+ DD  N   +L+  C ++ K+ LR GW+LH+
Sbjct: 84  LMRFFYSEIRRLTDTFNKH----GREQFQSDDVGNCLFDLEQDCSSQLKFKLRAGWQLHL 139

Query: 85  YISQLPCGHASLSS 44
           YISQLPCG AS+SS
Sbjct: 140 YISQLPCGDASVSS 153


>ref|XP_002273023.1| PREDICTED: tRNA-specific adenosine deaminase 1 [Vitis vinifera]
           gi|297745247|emb|CBI40327.3| unnamed protein product
           [Vitis vinifera]
          Length = 453

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 41/88 (46%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
 Frame = -3

Query: 262 LMRFFYTQIQYLTETRNKHAPSNGGKRFKVDD-DNLALELDPGCLNKGKYTLRRGWKLHM 86
           LMRFFYT+IQ L    N+H  + G ++ + DD  N+   LD     + K T+R GWKLH+
Sbjct: 99  LMRFFYTEIQSLLTISNRHTHNYGSEQLEGDDITNMLFHLDSDGPGQRKITMRAGWKLHL 158

Query: 85  YISQLPCGHASLSSLVSPLETVPLGESD 2
           YISQLPCG ASLS  +  L +  L   D
Sbjct: 159 YISQLPCGDASLSLPLFSLRSFALINGD 186


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