BLASTX nr result

ID: Glycyrrhiza24_contig00032304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032304
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548718.1| PREDICTED: DNA (cytosine-5)-methyltransferas...   125   5e-27
ref|XP_002303458.1| DNA methyltransferase [Populus trichocarpa] ...   102   4e-20
ref|XP_004146191.1| PREDICTED: DNA (cytosine-5)-methyltransferas...    98   6e-19
ref|XP_002519960.1| protein with unknown function [Ricinus commu...    96   3e-18
ref|XP_002870005.1| chromomethylase 2 [Arabidopsis lyrata subsp....    91   1e-16

>ref|XP_003548718.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Glycine
           max]
          Length = 1143

 Score =  125 bits (313), Expect = 5e-27
 Identities = 61/99 (61%), Positives = 71/99 (71%)
 Frame = +1

Query: 1   ESLKLNHPDTHVRNESAEDFXXXXXXXXXXXXRFKVSDGERTMPLRSKSSGVKKQVNSQA 180
           ESLKLNH DTHVRNESAEDF            R+ VS  ER +P RS SSG KK+ NS+ 
Sbjct: 571 ESLKLNHSDTHVRNESAEDFLELLKAWEKLCKRYNVSSTERKLPFRSNSSGAKKRGNSEV 630

Query: 181 CDIPASEYEVSRLVDICYGDPSKTGKRSLYLKVHWKGHS 297
            +I   E EVS+LVDIC+GDP++TGKR LYLKVHWKG+S
Sbjct: 631 HEISDGELEVSKLVDICFGDPNETGKRGLYLKVHWKGYS 669


>ref|XP_002303458.1| DNA methyltransferase [Populus trichocarpa]
           gi|222840890|gb|EEE78437.1| DNA methyltransferase
           [Populus trichocarpa]
          Length = 729

 Score =  102 bits (253), Expect = 4e-20
 Identities = 54/101 (53%), Positives = 65/101 (64%), Gaps = 2/101 (1%)
 Frame = +1

Query: 1   ESLKLNHPDTHVRNESAEDFXXXXXXXXXXXXRFKVSDGERTMPLRSKSSGVKKQV--NS 174
           +SLKLNHP+THVRNE+AEDF            R+ V+D  RT   RS +S + KQ   +S
Sbjct: 212 QSLKLNHPETHVRNEAAEDFLELLKEWQKLCKRYAVNDVGRTHKSRSMASSMSKQNKNSS 271

Query: 175 QACDIPASEYEVSRLVDICYGDPSKTGKRSLYLKVHWKGHS 297
              DI + EYEV+RLVDICYG   K GKR L  KVHWKG+S
Sbjct: 272 NDDDIASGEYEVARLVDICYGKTDKRGKRGLKFKVHWKGYS 312


>ref|XP_004146191.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Cucumis
            sativus] gi|449512953|ref|XP_004164187.1| PREDICTED: DNA
            (cytosine-5)-methyltransferase CMT2-like [Cucumis
            sativus]
          Length = 1243

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 48/98 (48%), Positives = 64/98 (65%)
 Frame = +1

Query: 1    ESLKLNHPDTHVRNESAEDFXXXXXXXXXXXXRFKVSDGERTMPLRSKSSGVKKQVNSQA 180
            ESL+LNHP+THVRNE+AEDF            R+K ++ E +  LRSK++      + + 
Sbjct: 717  ESLRLNHPETHVRNETAEDFLDLLKEWEKLCRRYKANESEGSHQLRSKANDYLTSSDDED 776

Query: 181  CDIPASEYEVSRLVDICYGDPSKTGKRSLYLKVHWKGH 294
             + P SE+EVS LVDICYGDP++TGKR L   V WKG+
Sbjct: 777  -EFPTSEFEVSSLVDICYGDPTRTGKRGLMFLVRWKGY 813


>ref|XP_002519960.1| protein with unknown function [Ricinus communis]
           gi|223541006|gb|EEF42564.1| protein with unknown
           function [Ricinus communis]
          Length = 734

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 50/101 (49%), Positives = 63/101 (62%), Gaps = 2/101 (1%)
 Frame = +1

Query: 1   ESLKLNHPDTHVRNESAEDFXXXXXXXXXXXXRFKVSDGERTMPLRSKSSGVKKQVNSQA 180
           ESLKLNHP+T+VRNE+AEDF            R+ V D +     RS +S V ++ ++  
Sbjct: 203 ESLKLNHPETNVRNEAAEDFLELLKVWEKLCKRYAVKDIKSMQQSRSIASRVAEENDNSL 262

Query: 181 CD--IPASEYEVSRLVDICYGDPSKTGKRSLYLKVHWKGHS 297
            D  I   EYEVS+LVD+CYGDP   GKR L  KVHWKG+S
Sbjct: 263 SDNDITPGEYEVSKLVDLCYGDPDNIGKRGLKFKVHWKGYS 303


>ref|XP_002870005.1| chromomethylase 2 [Arabidopsis lyrata subsp. lyrata]
            gi|297315841|gb|EFH46264.1| chromomethylase 2
            [Arabidopsis lyrata subsp. lyrata]
          Length = 1253

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 47/100 (47%), Positives = 62/100 (62%), Gaps = 2/100 (2%)
 Frame = +1

Query: 1    ESLKLNHPDTHVRNESAEDFXXXXXXXXXXXXRFKVSDGERTMPLRSKSS--GVKKQVNS 174
            ESLKLNHP+T VRN++A DF            R+  ++ +RT  LRS +S     +  +S
Sbjct: 726  ESLKLNHPNTQVRNDAAGDFLQLLKEWDKLCKRYVFNNDQRTDTLRSVNSIKETSESSSS 785

Query: 175  QACDIPASEYEVSRLVDICYGDPSKTGKRSLYLKVHWKGH 294
            +  D  + EYEV +LVDIC+GDP KTGK  L  KVHWKG+
Sbjct: 786  RDDDSDSEEYEVEKLVDICFGDPDKTGKNGLKFKVHWKGY 825


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