BLASTX nr result

ID: Glycyrrhiza24_contig00032298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032298
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621559.1| E3 ubiquitin-protein ligase UBR4 [Medicago t...   181   5e-44
gb|ABN07919.1| Zinc finger, N-recognin; WD40-like [Medicago trun...   181   5e-44
ref|XP_003551779.1| PREDICTED: auxin transport protein BIG-like ...   164   7e-39
ref|XP_003633742.1| PREDICTED: LOW QUALITY PROTEIN: auxin transp...   110   9e-23
emb|CBI16927.3| unnamed protein product [Vitis vinifera]              110   9e-23

>ref|XP_003621559.1| E3 ubiquitin-protein ligase UBR4 [Medicago truncatula]
           gi|355496574|gb|AES77777.1| E3 ubiquitin-protein ligase
           UBR4 [Medicago truncatula]
          Length = 5158

 Score =  181 bits (459), Expect = 5e-44
 Identities = 91/103 (88%), Positives = 98/103 (95%)
 Frame = -2

Query: 313 AVVHGKCTPRLILLCNKLAKVQDVSDERAVGQNFRRRLSFVLRILKILGSLMKDVPYVEY 134
           AVVHGKCTPRLILLCNKLAKVQDV DER +GQNFRRRLSF+LR+LKILGSL  DVPYVEY
Sbjct: 282 AVVHGKCTPRLILLCNKLAKVQDVFDERELGQNFRRRLSFILRMLKILGSLTTDVPYVEY 341

Query: 133 DASLMRAVASFSDTLSNLFRVKLDFVNTYATIEGSFESIILMV 5
           DASLMRAVASF+DTLSNLFRVKL+FV+TYATIEGS ESI+LMV
Sbjct: 342 DASLMRAVASFTDTLSNLFRVKLEFVSTYATIEGSLESIVLMV 384


>gb|ABN07919.1| Zinc finger, N-recognin; WD40-like [Medicago truncatula]
          Length = 2165

 Score =  181 bits (459), Expect = 5e-44
 Identities = 91/103 (88%), Positives = 98/103 (95%)
 Frame = -2

Query: 313 AVVHGKCTPRLILLCNKLAKVQDVSDERAVGQNFRRRLSFVLRILKILGSLMKDVPYVEY 134
           AVVHGKCTPRLILLCNKLAKVQDV DER +GQNFRRRLSF+LR+LKILGSL  DVPYVEY
Sbjct: 166 AVVHGKCTPRLILLCNKLAKVQDVFDERELGQNFRRRLSFILRMLKILGSLTTDVPYVEY 225

Query: 133 DASLMRAVASFSDTLSNLFRVKLDFVNTYATIEGSFESIILMV 5
           DASLMRAVASF+DTLSNLFRVKL+FV+TYATIEGS ESI+LMV
Sbjct: 226 DASLMRAVASFTDTLSNLFRVKLEFVSTYATIEGSLESIVLMV 268


>ref|XP_003551779.1| PREDICTED: auxin transport protein BIG-like [Glycine max]
          Length = 5112

 Score =  164 bits (415), Expect = 7e-39
 Identities = 80/104 (76%), Positives = 96/104 (92%)
 Frame = -2

Query: 313 AVVHGKCTPRLILLCNKLAKVQDVSDERAVGQNFRRRLSFVLRILKILGSLMKDVPYVEY 134
           AVVHGKCTPRLILLCNKLAKV++V DE+A+ QNFRRRLSF+LR+LKILGSL+KDVPYVEY
Sbjct: 225 AVVHGKCTPRLILLCNKLAKVKNVFDEKAMSQNFRRRLSFILRMLKILGSLLKDVPYVEY 284

Query: 133 DASLMRAVASFSDTLSNLFRVKLDFVNTYATIEGSFESIILMVM 2
           DASLM AVA+FS+TL +LFR+  ++VNT++  EGSFESIILMV+
Sbjct: 285 DASLMGAVATFSNTLFSLFRINFEYVNTFSVTEGSFESIILMVI 328


>ref|XP_003633742.1| PREDICTED: LOW QUALITY PROTEIN: auxin transport protein BIG-like
            [Vitis vinifera]
          Length = 6279

 Score =  110 bits (276), Expect = 9e-23
 Identities = 54/105 (51%), Positives = 79/105 (75%), Gaps = 1/105 (0%)
 Frame = -2

Query: 313  AVVHGKCTPRLILLCNKLAKVQDV-SDERAVGQNFRRRLSFVLRILKILGSLMKDVPYVE 137
            AV+H  C  RLI LC +L  + D+  DE+  G NFR+RLSF LRILK+LGSL +D+PYVE
Sbjct: 1390 AVLHVGCIQRLIRLCKELLILPDMFDDEKTAGINFRKRLSFGLRILKLLGSLTRDIPYVE 1449

Query: 136  YDASLMRAVASFSDTLSNLFRVKLDFVNTYATIEGSFESIILMVM 2
            YD +L++AVAS +D L +LF+   +F N++A +E SFE+++L+++
Sbjct: 1450 YDPALLQAVASCADVLPSLFKPGFEFANSHAPVESSFENLVLLLL 1494


>emb|CBI16927.3| unnamed protein product [Vitis vinifera]
          Length = 4380

 Score =  110 bits (276), Expect = 9e-23
 Identities = 54/105 (51%), Positives = 79/105 (75%), Gaps = 1/105 (0%)
 Frame = -2

Query: 313 AVVHGKCTPRLILLCNKLAKVQDV-SDERAVGQNFRRRLSFVLRILKILGSLMKDVPYVE 137
           AV+H  C  RLI LC +L  + D+  DE+  G NFR+RLSF LRILK+LGSL +D+PYVE
Sbjct: 256 AVLHVGCIQRLIRLCKELLILPDMFDDEKTAGINFRKRLSFGLRILKLLGSLTRDIPYVE 315

Query: 136 YDASLMRAVASFSDTLSNLFRVKLDFVNTYATIEGSFESIILMVM 2
           YD +L++AVAS +D L +LF+   +F N++A +E SFE+++L+++
Sbjct: 316 YDPALLQAVASCADVLPSLFKPGFEFANSHAPVESSFENLVLLLL 360


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