BLASTX nr result

ID: Glycyrrhiza24_contig00032261 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032261
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532827.1| PREDICTED: 50S ribosomal protein L23-like [G...    82   5e-14
ref|XP_003524264.1| PREDICTED: 50S ribosomal protein L23-like [G...    79   5e-13
gb|ADE76478.1| unknown [Picea sitchensis]                              67   1e-09
ref|XP_001766651.1| predicted protein [Physcomitrella patens sub...    62   4e-08
ref|XP_004137193.1| PREDICTED: 50S ribosomal protein L23-like [C...    62   5e-08

>ref|XP_003532827.1| PREDICTED: 50S ribosomal protein L23-like [Glycine max]
          Length = 113

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 39/52 (75%), Positives = 45/52 (86%)
 Frame = +2

Query: 149 MAHIANLPLTPLMPPATSSSEIKEIAFKTVPSASKVEIKRVLESFYDLQVQK 304
           MAHI NLP+TPLMP +TSS+ IKEIAFKT PSASKVEIKR LE+FY  +V+K
Sbjct: 1   MAHITNLPMTPLMPASTSSNNIKEIAFKTAPSASKVEIKRFLETFYGFEVEK 52


>ref|XP_003524264.1| PREDICTED: 50S ribosomal protein L23-like [Glycine max]
          Length = 111

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 39/52 (75%), Positives = 46/52 (88%)
 Frame = +2

Query: 149 MAHIANLPLTPLMPPATSSSEIKEIAFKTVPSASKVEIKRVLESFYDLQVQK 304
           MAHI NLP+TPLMP +TSS++IKEIAFKT PSASKVEIKR LE+FY  +V+K
Sbjct: 1   MAHITNLPMTPLMP-STSSNDIKEIAFKTAPSASKVEIKRFLETFYGFEVEK 51


>gb|ADE76478.1| unknown [Picea sitchensis]
          Length = 164

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 34/54 (62%), Positives = 42/54 (77%)
 Frame = +2

Query: 143 KTMAHIANLPLTPLMPPATSSSEIKEIAFKTVPSASKVEIKRVLESFYDLQVQK 304
           + + H ANLPL  +MP  +S   IKE+AFKTVPSASK+EIKRVLES Y L+V+K
Sbjct: 7   RRVVHFANLPLKLVMP--SSRENIKEVAFKTVPSASKIEIKRVLESLYGLEVEK 58


>ref|XP_001766651.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162682083|gb|EDQ68504.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 106

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 32/52 (61%), Positives = 38/52 (73%)
 Frame = +2

Query: 149 MAHIANLPLTPLMPPATSSSEIKEIAFKTVPSASKVEIKRVLESFYDLQVQK 304
           + H ANLPL  L+P   S   I E+AFKT+PSASK+EIKRVLE+ Y LQV K
Sbjct: 10  IVHFANLPLKLLLP--NSRENITEVAFKTIPSASKIEIKRVLETLYGLQVAK 59


>ref|XP_004137193.1| PREDICTED: 50S ribosomal protein L23-like [Cucumis sativus]
           gi|449483270|ref|XP_004156540.1| PREDICTED: 50S
           ribosomal protein L23-like isoform 1 [Cucumis sativus]
           gi|449483272|ref|XP_004156541.1| PREDICTED: 50S
           ribosomal protein L23-like isoform 2 [Cucumis sativus]
          Length = 174

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 32/54 (59%), Positives = 39/54 (72%)
 Frame = +2

Query: 143 KTMAHIANLPLTPLMPPATSSSEIKEIAFKTVPSASKVEIKRVLESFYDLQVQK 304
           + + H ANLP+  LMP  TS + I EIA KT+PSASK+EIKRVLES Y  +V K
Sbjct: 7   RRVVHFANLPIKLLMP--TSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDK 58


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