BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032254
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containi...   157   1e-36
ref|XP_003588474.1| Pentatricopeptide repeat-containing protein ...   146   2e-33
ref|XP_003540920.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   129   2e-28
ref|XP_002525227.1| pentatricopeptide repeat-containing protein,...   123   2e-26
ref|XP_003635652.1| PREDICTED: pentatricopeptide repeat-containi...   107   1e-21

>ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Glycine max]
          Length = 647

 Score =  157 bits (396), Expect = 1e-36
 Identities = 78/105 (74%), Positives = 90/105 (85%)
 Frame = +1

Query: 7   SDYYIIDDKNLLRPSIHNNNSKTGLHVLDLIDRGSLEPDRTLYNALLKRCTQLGKLREGR 186
           S + +IDD+NLLRPS+   NSKTGLHVLDLID GSLEPDRTLYN LLKRCTQLGKL+EG+
Sbjct: 38  STFCVIDDRNLLRPSL---NSKTGLHVLDLIDCGSLEPDRTLYNTLLKRCTQLGKLKEGK 94

Query: 187 IVHSHILNYPNSNNLRHDLFIQNSILFMYARCGSLEDARRVFDEM 321
           +VH H+LN    +N +HDL IQNS+LFMYARCGSLE ARR+FDEM
Sbjct: 95  LVHFHVLN----SNFKHDLVIQNSLLFMYARCGSLEGARRLFDEM 135


>ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355477522|gb|AES58725.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 668

 Score =  146 bits (368), Expect = 2e-33
 Identities = 72/103 (69%), Positives = 88/103 (85%)
 Frame = +1

Query: 13  YYIIDDKNLLRPSIHNNNSKTGLHVLDLIDRGSLEPDRTLYNALLKRCTQLGKLREGRIV 192
           +YIIDD NLLRPS+ N NS TGLHVLDLI+ GSLEPDRT+YN LLKRCT LGKL++G++V
Sbjct: 55  HYIIDDTNLLRPSL-NPNSTTGLHVLDLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLV 113

Query: 193 HSHILNYPNSNNLRHDLFIQNSILFMYARCGSLEDARRVFDEM 321
           H+H++N    +  R+DL I+NSILFMYA+CGSLE AR+VFDEM
Sbjct: 114 HTHLMN----SKFRNDLVIKNSILFMYAKCGSLEIARQVFDEM 152


>ref|XP_003540920.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g24000, mitochondrial-like [Glycine max]
          Length = 622

 Score =  129 bits (324), Expect = 2e-28
 Identities = 65/101 (64%), Positives = 79/101 (78%)
 Frame = +1

Query: 16  YIIDDKNLLRPSIHNNNSKTGLHVLDLIDRGSLEPDRTLYNALLKRCTQLGKLREGRIVH 195
           Y+ID+KNLLRPS+   NSK GLHVLDLID GS E D TLYN LLKRCTQLGKL+EG++VH
Sbjct: 31  YVIDNKNLLRPSL---NSKIGLHVLDLIDCGSFELDLTLYNTLLKRCTQLGKLKEGKLVH 87

Query: 196 SHILNYPNSNNLRHDLFIQNSILFMYARCGSLEDARRVFDE 318
            H+ N    +  + DL IQN +LFMYARCG+L+D + VF+E
Sbjct: 88  FHMFN----SKFKDDLVIQNFVLFMYARCGNLKDTQHVFNE 124


>ref|XP_002525227.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535524|gb|EEF37193.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 420

 Score =  123 bits (308), Expect = 2e-26
 Identities = 62/105 (59%), Positives = 82/105 (78%)
 Frame = +1

Query: 7   SDYYIIDDKNLLRPSIHNNNSKTGLHVLDLIDRGSLEPDRTLYNALLKRCTQLGKLREGR 186
           S   II++K+LLR S+  + S TGLHVLDLIDR SLEPDRTLY+ L K+CT   KL+EG+
Sbjct: 44  SSSLIIEEKDLLRHSL--DQSGTGLHVLDLIDRASLEPDRTLYHILFKKCTLFNKLKEGQ 101

Query: 187 IVHSHILNYPNSNNLRHDLFIQNSILFMYARCGSLEDARRVFDEM 321
           +VH+H+LN    +  +HDL IQN+IL MYA+CG+L +AR+VFD+M
Sbjct: 102 LVHAHLLN----SRFKHDLVIQNTILNMYAKCGNLGEARKVFDQM 142


>ref|XP_003635652.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like, partial [Vitis vinifera]
          Length = 262

 Score =  107 bits (267), Expect = 1e-21
 Identities = 55/105 (52%), Positives = 77/105 (73%)
 Frame = +1

Query: 7   SDYYIIDDKNLLRPSIHNNNSKTGLHVLDLIDRGSLEPDRTLYNALLKRCTQLGKLREGR 186
           + + +  DK+LLR S   ++  TGL+ LDLI RGSL PD  LY+ LLK CT+LGK+ +GR
Sbjct: 50  TSFCVFQDKDLLRKS--QSDGGTGLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGR 107

Query: 187 IVHSHILNYPNSNNLRHDLFIQNSILFMYARCGSLEDARRVFDEM 321
           IVH+H++   +S+ L + L +QN I+ MYA+CG L+DARR+FDEM
Sbjct: 108 IVHAHLV---DSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEM 149