BLASTX nr result

ID: Glycyrrhiza24_contig00032244 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032244
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526650.1| PREDICTED: pentatricopeptide repeat-containi...   244   4e-63
ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containi...   234   7e-60
emb|CBI18974.3| unnamed protein product [Vitis vinifera]              234   7e-60
ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containi...   231   6e-59
ref|XP_002520317.1| pentatricopeptide repeat-containing protein,...   231   6e-59

>ref|XP_003526650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Glycine max]
          Length = 461

 Score =  244 bits (624), Expect = 4e-63
 Identities = 117/140 (83%), Positives = 131/140 (93%)
 Frame = -3

Query: 498 RTCNVIISSLISQGETDRAFRVFRRMIKSCEPDADTYTMLIKMYCERNEVDMALKIWRYM 319
           RTCNVIISS+I QG+TDRAFRVF RMIK CEPDADTYTM+IKM+CE+NE++MALKIW+YM
Sbjct: 322 RTCNVIISSMIGQGQTDRAFRVFCRMIKLCEPDADTYTMMIKMFCEKNELEMALKIWKYM 381

Query: 318 KSKRFVPSMHTFSALINGLCGKGDVMKACVLLEEMIEKGIRPSRVTFGRLRQLLIKEGRE 139
           KSK+FVPSMHTFSALI GLC K +  KACV++EEMIEKGIRPSR+TFGRLRQLLIKEGRE
Sbjct: 382 KSKQFVPSMHTFSALIKGLCEKDNAAKACVVMEEMIEKGIRPSRITFGRLRQLLIKEGRE 441

Query: 138 DVLKFLHEKINLLVKEPLCD 79
           DVLKFLHEK+NLLVKEPL D
Sbjct: 442 DVLKFLHEKMNLLVKEPLYD 461


>ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Vitis vinifera]
          Length = 476

 Score =  234 bits (596), Expect = 7e-60
 Identities = 108/140 (77%), Positives = 129/140 (92%)
 Frame = -3

Query: 498 RTCNVIISSLISQGETDRAFRVFRRMIKSCEPDADTYTMLIKMYCERNEVDMALKIWRYM 319
           RTCN+I++SLIS G+TD AFRVFRRMIK C+PDADTYTM+IKM+CE ++++MALK+W+YM
Sbjct: 321 RTCNIILNSLISCGDTDEAFRVFRRMIKVCDPDADTYTMMIKMFCENDKLEMALKVWKYM 380

Query: 318 KSKRFVPSMHTFSALINGLCGKGDVMKACVLLEEMIEKGIRPSRVTFGRLRQLLIKEGRE 139
           + K+FVPSMHTFS LINGLC KG+  KAC+LLEEMIEKGIRPS VTFG+L+QLLIKEGRE
Sbjct: 381 RLKQFVPSMHTFSVLINGLCKKGNASKACILLEEMIEKGIRPSSVTFGKLKQLLIKEGRE 440

Query: 138 DVLKFLHEKINLLVKEPLCD 79
           DVL+FL EK+NLLVKEPLCD
Sbjct: 441 DVLEFLQEKMNLLVKEPLCD 460


>emb|CBI18974.3| unnamed protein product [Vitis vinifera]
          Length = 324

 Score =  234 bits (596), Expect = 7e-60
 Identities = 108/140 (77%), Positives = 129/140 (92%)
 Frame = -3

Query: 498 RTCNVIISSLISQGETDRAFRVFRRMIKSCEPDADTYTMLIKMYCERNEVDMALKIWRYM 319
           RTCN+I++SLIS G+TD AFRVFRRMIK C+PDADTYTM+IKM+CE ++++MALK+W+YM
Sbjct: 169 RTCNIILNSLISCGDTDEAFRVFRRMIKVCDPDADTYTMMIKMFCENDKLEMALKVWKYM 228

Query: 318 KSKRFVPSMHTFSALINGLCGKGDVMKACVLLEEMIEKGIRPSRVTFGRLRQLLIKEGRE 139
           + K+FVPSMHTFS LINGLC KG+  KAC+LLEEMIEKGIRPS VTFG+L+QLLIKEGRE
Sbjct: 229 RLKQFVPSMHTFSVLINGLCKKGNASKACILLEEMIEKGIRPSSVTFGKLKQLLIKEGRE 288

Query: 138 DVLKFLHEKINLLVKEPLCD 79
           DVL+FL EK+NLLVKEPLCD
Sbjct: 289 DVLEFLQEKMNLLVKEPLCD 308


>ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Cucumis sativus]
           gi|449499065|ref|XP_004160711.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Cucumis sativus]
          Length = 439

 Score =  231 bits (588), Expect = 6e-59
 Identities = 109/140 (77%), Positives = 124/140 (88%)
 Frame = -3

Query: 498 RTCNVIISSLISQGETDRAFRVFRRMIKSCEPDADTYTMLIKMYCERNEVDMALKIWRYM 319
           RTCN+II+SLI +GETD AF++FRRMIK CEPD D+YTM+IKM+C R E+DMALKIW+YM
Sbjct: 300 RTCNIIINSLIGRGETDEAFKIFRRMIKVCEPDVDSYTMIIKMFCGRKELDMALKIWKYM 359

Query: 318 KSKRFVPSMHTFSALINGLCGKGDVMKACVLLEEMIEKGIRPSRVTFGRLRQLLIKEGRE 139
           K K+FVPSMHTFS LINGLC  G+  +ACVLLEEMIEKGIRPS  TFGRLR LLIKEGR+
Sbjct: 360 KKKQFVPSMHTFSVLINGLCQIGNATQACVLLEEMIEKGIRPSGATFGRLRHLLIKEGRK 419

Query: 138 DVLKFLHEKINLLVKEPLCD 79
           DVLKFL EK+NLLVKEPLCD
Sbjct: 420 DVLKFLQEKMNLLVKEPLCD 439


>ref|XP_002520317.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540536|gb|EEF42103.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 439

 Score =  231 bits (588), Expect = 6e-59
 Identities = 108/140 (77%), Positives = 127/140 (90%)
 Frame = -3

Query: 498 RTCNVIISSLISQGETDRAFRVFRRMIKSCEPDADTYTMLIKMYCERNEVDMALKIWRYM 319
           RT N+I+++LI++GETD AFRVFRRMIK CEPDADTYTM+IKM+CERNE++MALK+W+YM
Sbjct: 300 RTLNIILNNLIARGETDEAFRVFRRMIKVCEPDADTYTMMIKMFCERNELEMALKVWKYM 359

Query: 318 KSKRFVPSMHTFSALINGLCGKGDVMKACVLLEEMIEKGIRPSRVTFGRLRQLLIKEGRE 139
           K K FVPSMHTFS LINGLC +GDV  ACV+LE+MIEKGIRPS VTFGRLR LLIKEGRE
Sbjct: 360 KKKHFVPSMHTFSVLINGLCEEGDVSHACVMLEDMIEKGIRPSGVTFGRLRHLLIKEGRE 419

Query: 138 DVLKFLHEKINLLVKEPLCD 79
           DVL+FL +KIN+L+KEPL D
Sbjct: 420 DVLEFLQQKINVLIKEPLWD 439


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