BLASTX nr result

ID: Glycyrrhiza24_contig00032240 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032240
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519512.1| PREDICTED: uncharacterized protein LOC100805...   110   1e-22
gb|ADV35716.2| root determined nodulation 1 [Medicago truncatula]     105   4e-21
ref|NP_001239722.1| uncharacterized protein LOC100812050 [Glycin...    98   8e-19
ref|XP_003617252.1| hypothetical protein MTR_5g089520 [Medicago ...    96   2e-18
gb|ADV35717.1| NOD3 [Pisum sativum] gi|318054557|gb|ADV35718.1| ...    93   2e-17

>ref|XP_003519512.1| PREDICTED: uncharacterized protein LOC100805374 [Glycine max]
          Length = 356

 Score =  110 bits (275), Expect = 1e-22
 Identities = 55/84 (65%), Positives = 63/84 (75%)
 Frame = -1

Query: 253 MIVRKNMGRXXXXXXXXXXMGFSFATYNLVSMIIDHNKEGGLESFDHGRVVTGSTNSKFH 74
           MIVRK MGR          + FSFATYNLV+MI+DH K  GLES +   +V+G TNSKFH
Sbjct: 1   MIVRKGMGRAKSLLLLLMVLLFSFATYNLVAMIMDH-KADGLESLNRKMMVSGKTNSKFH 59

Query: 73  VTVTATDAAYSQWQCRIVYYWYKK 2
           V VTATDAAY+QWQCRI+YYWYKK
Sbjct: 60  VAVTATDAAYNQWQCRIMYYWYKK 83


>gb|ADV35716.2| root determined nodulation 1 [Medicago truncatula]
          Length = 357

 Score =  105 bits (262), Expect = 4e-21
 Identities = 51/84 (60%), Positives = 60/84 (71%)
 Frame = -1

Query: 253 MIVRKNMGRXXXXXXXXXXMGFSFATYNLVSMIIDHNKEGGLESFDHGRVVTGSTNSKFH 74
           MIVRK+MGR          +GFSFATYNLV M+++H     L SFD   +   +TNSK+H
Sbjct: 1   MIVRKSMGRVKSLLMLLMVLGFSFATYNLVFMMMEHKAGNDLGSFDGKAMEIRNTNSKYH 60

Query: 73  VTVTATDAAYSQWQCRIVYYWYKK 2
           V VTATDAAYSQWQCRI+YYWYKK
Sbjct: 61  VAVTATDAAYSQWQCRIMYYWYKK 84


>ref|NP_001239722.1| uncharacterized protein LOC100812050 [Glycine max]
           gi|255647741|gb|ACU24331.1| unknown [Glycine max]
          Length = 363

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 48/84 (57%), Positives = 61/84 (72%)
 Frame = -1

Query: 253 MIVRKNMGRXXXXXXXXXXMGFSFATYNLVSMIIDHNKEGGLESFDHGRVVTGSTNSKFH 74
           M+VRK+MGR          + FSFATYNLV+MI++   +G  ESF+   + +G TNSKFH
Sbjct: 1   MVVRKSMGRAKSLLLLLMVLIFSFATYNLVAMIMNLKTDGS-ESFNRKIMRSGKTNSKFH 59

Query: 73  VTVTATDAAYSQWQCRIVYYWYKK 2
           V +TATD+ YSQWQCRI+YYWYKK
Sbjct: 60  VALTATDSPYSQWQCRIMYYWYKK 83


>ref|XP_003617252.1| hypothetical protein MTR_5g089520 [Medicago truncatula]
           gi|355518587|gb|AET00211.1| hypothetical protein
           MTR_5g089520 [Medicago truncatula]
          Length = 351

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 46/78 (58%), Positives = 54/78 (69%)
 Frame = -1

Query: 235 MGRXXXXXXXXXXMGFSFATYNLVSMIIDHNKEGGLESFDHGRVVTGSTNSKFHVTVTAT 56
           MGR          +GFSFATYNLV M+++H     L SFD   +   +TNSK+HV VTAT
Sbjct: 1   MGRVKSLLMLLMVLGFSFATYNLVFMMMEHKAGNDLGSFDGKAMEIRNTNSKYHVAVTAT 60

Query: 55  DAAYSQWQCRIVYYWYKK 2
           DAAYSQWQCRI+YYWYKK
Sbjct: 61  DAAYSQWQCRIMYYWYKK 78


>gb|ADV35717.1| NOD3 [Pisum sativum] gi|318054557|gb|ADV35718.1| NOD3 [Pisum
           sativum]
          Length = 334

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 44/64 (68%), Positives = 48/64 (75%)
 Frame = -1

Query: 193 GFSFATYNLVSMIIDHNKEGGLESFDHGRVVTGSTNSKFHVTVTATDAAYSQWQCRIVYY 14
           GF FATYNLVSMI+ H     L S   G+V   +T SKFHV VTATDAAYSQWQCRI+YY
Sbjct: 6   GFFFATYNLVSMIVGHKVGSDLGSIVDGKVEFTNTKSKFHVAVTATDAAYSQWQCRIMYY 65

Query: 13  WYKK 2
           WYKK
Sbjct: 66  WYKK 69


Top