BLASTX nr result

ID: Glycyrrhiza24_contig00032221 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032221
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528344.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   226   2e-57
ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   172   3e-41
gb|ADN33705.1| RNA-dependent RNA polymerase [Cucumis melo subsp....   171   7e-41
emb|CBI26820.3| unnamed protein product [Vitis vinifera]              168   4e-40
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V...   168   4e-40

>ref|XP_003528344.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Glycine max]
          Length = 1135

 Score =  226 bits (575), Expect = 2e-57
 Identities = 109/135 (80%), Positives = 118/135 (87%)
 Frame = -1

Query: 405  KGLTKPFTRKAASKLYDHDMVIDGFEKYTATACEYKHMYDTKLGNLMDYYGIETEAEIIS 226
            K L K FTR+ A + YD DM IDGFEKYTATACEYK+MYD KLGNLMDYYGIETEAEIIS
Sbjct: 946  KNLNKTFTRRVARQSYDPDMEIDGFEKYTATACEYKNMYDFKLGNLMDYYGIETEAEIIS 1005

Query: 225  GSILKMSKSFNDRKDLEGINHAVMSLRKEARSWFNEMISKSNSQGGDGDAYAVASAWYHV 46
            G+ILKMSKSFN+RKDLEGINHAVMSLRKE RSWFN M++KSNSQG   DAYA+ASAWY V
Sbjct: 1006 GNILKMSKSFNERKDLEGINHAVMSLRKETRSWFNVMVNKSNSQG--RDAYAIASAWYLV 1063

Query: 45   TYHPSYWGRYNEGLN 1
            TYHP YWG YN+GLN
Sbjct: 1064 TYHPRYWGSYNQGLN 1078


>ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Glycine max]
          Length = 1125

 Score =  172 bits (436), Expect = 3e-41
 Identities = 84/134 (62%), Positives = 96/134 (71%)
 Frame = -1

Query: 402  GLTKPFTRKAASKLYDHDMVIDGFEKYTATACEYKHMYDTKLGNLMDYYGIETEAEIISG 223
            G    FT+  A   YDH+M +DGF  Y   A  +K  YD KLGNLMDYYGI+TEAEI+ G
Sbjct: 953  GSITSFTKLVARDSYDHEMEVDGFMDYVDDAFYHKTNYDYKLGNLMDYYGIKTEAEILGG 1012

Query: 222  SILKMSKSFNDRKDLEGINHAVMSLRKEARSWFNEMISKSNSQGGDGDAYAVASAWYHVT 43
            +I+KMSKSFN R+D E IN AV SLRKEAR+WFNE  S  +   G  D YA ASAWYHVT
Sbjct: 1013 NIMKMSKSFNKRRDAEAINMAVRSLRKEARAWFNEN-SSGDVDSGSSDVYAKASAWYHVT 1071

Query: 42   YHPSYWGRYNEGLN 1
            YHPSYWG YNEG+N
Sbjct: 1072 YHPSYWGCYNEGMN 1085


>gb|ADN33705.1| RNA-dependent RNA polymerase [Cucumis melo subsp. melo]
          Length = 1137

 Score =  171 bits (432), Expect = 7e-41
 Identities = 82/127 (64%), Positives = 96/127 (75%)
 Frame = -1

Query: 387  FTRKAASKLYDHDMVIDGFEKYTATACEYKHMYDTKLGNLMDYYGIETEAEIISGSILKM 208
            FT++ A+K YD DM +DGFEKY   A +YK  YD KLGNLMDYYGI+TE E++SG+ILKM
Sbjct: 965  FTKEVATKCYDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSGNILKM 1024

Query: 207  SKSFNDRKDLEGINHAVMSLRKEARSWFNEMISKSNSQGGDGDAYAVASAWYHVTYHPSY 28
            +KSF+ R DLE I  A+ SLRKE RSWFNE  SK   +  + D YA ASAWY VTYHP Y
Sbjct: 1025 AKSFDKRNDLEQIAFAMKSLRKEVRSWFNENESKYTYEDIEDDEYARASAWYCVTYHPDY 1084

Query: 27   WGRYNEG 7
            WGRYNEG
Sbjct: 1085 WGRYNEG 1091


>emb|CBI26820.3| unnamed protein product [Vitis vinifera]
          Length = 919

 Score =  168 bits (426), Expect = 4e-40
 Identities = 82/131 (62%), Positives = 100/131 (76%)
 Frame = -1

Query: 393  KPFTRKAASKLYDHDMVIDGFEKYTATACEYKHMYDTKLGNLMDYYGIETEAEIISGSIL 214
            + FTR  A + YD DM + GFE Y + A  YK  YD KLGNLMDYYGI+TE+EI+SGSI+
Sbjct: 747  RSFTRDVARQSYDPDMEVVGFEDYVSDAFYYKSEYDYKLGNLMDYYGIKTESEILSGSIM 806

Query: 213  KMSKSFNDRKDLEGINHAVMSLRKEARSWFNEMISKSNSQGGDGDAYAVASAWYHVTYHP 34
            +MSKSF+ RKD E I  AV SLRKEAR+WFN+M S+++S+    D YA ASAWYHVTYHP
Sbjct: 807  RMSKSFDRRKDAEAIGLAVKSLRKEARTWFNKMGSETDSEA--DDVYAKASAWYHVTYHP 864

Query: 33   SYWGRYNEGLN 1
             YWG YNEG++
Sbjct: 865  DYWGCYNEGMD 875


>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
          Length = 1121

 Score =  168 bits (426), Expect = 4e-40
 Identities = 82/131 (62%), Positives = 100/131 (76%)
 Frame = -1

Query: 393  KPFTRKAASKLYDHDMVIDGFEKYTATACEYKHMYDTKLGNLMDYYGIETEAEIISGSIL 214
            + FTR  A + YD DM + GFE Y + A  YK  YD KLGNLMDYYGI+TE+EI+SGSI+
Sbjct: 949  RSFTRDVARQSYDPDMEVVGFEDYVSDAFYYKSEYDYKLGNLMDYYGIKTESEILSGSIM 1008

Query: 213  KMSKSFNDRKDLEGINHAVMSLRKEARSWFNEMISKSNSQGGDGDAYAVASAWYHVTYHP 34
            +MSKSF+ RKD E I  AV SLRKEAR+WFN+M S+++S+    D YA ASAWYHVTYHP
Sbjct: 1009 RMSKSFDRRKDAEAIGLAVKSLRKEARTWFNKMGSETDSEA--DDVYAKASAWYHVTYHP 1066

Query: 33   SYWGRYNEGLN 1
             YWG YNEG++
Sbjct: 1067 DYWGCYNEGMD 1077


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