BLASTX nr result

ID: Glycyrrhiza24_contig00032212 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032212
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518970.1| PREDICTED: condensin complex subunit 1-like ...   171   4e-41
ref|XP_003632691.1| PREDICTED: condensin complex subunit 1-like ...   164   9e-39
emb|CBI30096.3| unnamed protein product [Vitis vinifera]              164   9e-39
ref|XP_002308898.1| condensin complex components subunit [Populu...   159   2e-37
ref|XP_004170408.1| PREDICTED: condensin complex subunit 1-like,...   153   1e-35

>ref|XP_003518970.1| PREDICTED: condensin complex subunit 1-like [Glycine max]
          Length = 1316

 Score =  171 bits (434), Expect = 4e-41
 Identities = 83/90 (92%), Positives = 88/90 (97%)
 Frame = -1

Query: 270  HISYCLSQLSFTEKGMKKLIDLFKTYEHVLSEDSVMDHFRNILNKGKKFAKPELKSCIEE 91
            +ISYCLSQLSFTEKGMKKLI+LFK+YEHVLSEDSVMDHFRNILNKGKKFAK ELK+CIEE
Sbjct: 1123 YISYCLSQLSFTEKGMKKLIELFKSYEHVLSEDSVMDHFRNILNKGKKFAKLELKACIEE 1182

Query: 90   FEDKLNKFHMEKKEQEVTARNAQIHQQKIG 1
            FEDKLNKFH +KKEQEVTARNAQIHQQKIG
Sbjct: 1183 FEDKLNKFHTDKKEQEVTARNAQIHQQKIG 1212


>ref|XP_003632691.1| PREDICTED: condensin complex subunit 1-like [Vitis vinifera]
          Length = 1346

 Score =  164 bits (414), Expect = 9e-39
 Identities = 74/90 (82%), Positives = 87/90 (96%)
 Frame = -1

Query: 270  HISYCLSQLSFTEKGMKKLIDLFKTYEHVLSEDSVMDHFRNILNKGKKFAKPELKSCIEE 91
            ++SYCLSQL+FTEKGMKKL++ FKTYEH LSEDSVMDHF+NI++K KKFAKPELKSCIEE
Sbjct: 1140 YVSYCLSQLAFTEKGMKKLMESFKTYEHALSEDSVMDHFKNIISKSKKFAKPELKSCIEE 1199

Query: 90   FEDKLNKFHMEKKEQEVTARNAQIHQQKIG 1
            FE+KLNKFH+E+KEQEVTARNAQ+HQQK+G
Sbjct: 1200 FEEKLNKFHVERKEQEVTARNAQVHQQKVG 1229


>emb|CBI30096.3| unnamed protein product [Vitis vinifera]
          Length = 1290

 Score =  164 bits (414), Expect = 9e-39
 Identities = 74/90 (82%), Positives = 87/90 (96%)
 Frame = -1

Query: 270  HISYCLSQLSFTEKGMKKLIDLFKTYEHVLSEDSVMDHFRNILNKGKKFAKPELKSCIEE 91
            ++SYCLSQL+FTEKGMKKL++ FKTYEH LSEDSVMDHF+NI++K KKFAKPELKSCIEE
Sbjct: 1071 YVSYCLSQLAFTEKGMKKLMESFKTYEHALSEDSVMDHFKNIISKSKKFAKPELKSCIEE 1130

Query: 90   FEDKLNKFHMEKKEQEVTARNAQIHQQKIG 1
            FE+KLNKFH+E+KEQEVTARNAQ+HQQK+G
Sbjct: 1131 FEEKLNKFHVERKEQEVTARNAQVHQQKVG 1160


>ref|XP_002308898.1| condensin complex components subunit [Populus trichocarpa]
            gi|222854874|gb|EEE92421.1| condensin complex components
            subunit [Populus trichocarpa]
          Length = 1334

 Score =  159 bits (403), Expect = 2e-37
 Identities = 77/90 (85%), Positives = 85/90 (94%)
 Frame = -1

Query: 270  HISYCLSQLSFTEKGMKKLIDLFKTYEHVLSEDSVMDHFRNILNKGKKFAKPELKSCIEE 91
            +ISYCLSQL+FTEKGMKKLID FKT+EHVLSEDSVMD+F++I+ K KKFAKPELK CIEE
Sbjct: 1145 YISYCLSQLAFTEKGMKKLIDSFKTFEHVLSEDSVMDNFKSIIIKAKKFAKPELKLCIEE 1204

Query: 90   FEDKLNKFHMEKKEQEVTARNAQIHQQKIG 1
            FE+KL KFHMEKKEQEVTARNAQIHQQKIG
Sbjct: 1205 FEEKLTKFHMEKKEQEVTARNAQIHQQKIG 1234


>ref|XP_004170408.1| PREDICTED: condensin complex subunit 1-like, partial [Cucumis
           sativus]
          Length = 187

 Score =  153 bits (387), Expect = 1e-35
 Identities = 71/89 (79%), Positives = 83/89 (93%)
 Frame = -1

Query: 270 HISYCLSQLSFTEKGMKKLIDLFKTYEHVLSEDSVMDHFRNILNKGKKFAKPELKSCIEE 91
           +ISYCL+QL FTEKGMKKLID FKTYEHV+SEDSVM+HF++I+NK KKFAKPELK C+EE
Sbjct: 6   YISYCLTQLGFTEKGMKKLIDSFKTYEHVVSEDSVMEHFKSIINKSKKFAKPELKLCVEE 65

Query: 90  FEDKLNKFHMEKKEQEVTARNAQIHQQKI 4
           FE+KLNK H E+KEQEVTARNA+IHQQ+I
Sbjct: 66  FEEKLNKAHAERKEQEVTARNAKIHQQRI 94


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