BLASTX nr result

ID: Glycyrrhiza24_contig00032208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032208
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas...    58   7e-07

>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase);
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 729

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
 Frame = -2

Query: 320 SILHLFRDCSRASQVWVSLANHRVLSNFFVGNFNMWLIENLKSDKV-INDLEWKTIFAIG 144
           +++H+ RDC  ++QVW+ L  H  ++NFF  +   W+  NL    +  N   W+T F   
Sbjct: 514 TVIHVLRDCVHSTQVWLRLIPHNYITNFFSFDCREWVFNNLNKKGIGDNPATWQTTFMTT 573

Query: 143 LLYLWQSRNLMVFQ 102
             YLW  RN  +F+
Sbjct: 574 CWYLWNWRNKSIFE 587


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