BLASTX nr result
ID: Glycyrrhiza24_contig00032192
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00032192 (433 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003517934.1| PREDICTED: chromodomain-helicase-DNA-binding... 172 2e-41 ref|XP_002326828.1| chromatin remodeling complex subunit [Populu... 155 4e-36 ref|XP_004166129.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain... 150 1e-34 ref|XP_004140512.1| PREDICTED: chromodomain-helicase-DNA-binding... 150 1e-34 ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding... 146 1e-33 >ref|XP_003517934.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Glycine max] Length = 1482 Score = 172 bits (437), Expect = 2e-41 Identities = 87/101 (86%), Positives = 94/101 (93%) Frame = +2 Query: 2 LHLIRLEDGCNEKNMDGNAPKMVALAVVQSYNPRRKVPRSEISLVHLESCLSKAAFSAAQ 181 LHLIRL+D C E+ MDGNAPKMVALAVVQSYNPR K+ RSEISL HLES L+KAA+SAAQ Sbjct: 1376 LHLIRLDDCCGEQ-MDGNAPKMVALAVVQSYNPRHKIRRSEISLPHLESSLTKAAYSAAQ 1434 Query: 182 NSASIHMPRIGYQDGSDRSQWYTIERLLRKYASIYNINIFV 304 NSASIHMPRIGYQDGSDRS+WYTIERLLRKYASIYNINI+V Sbjct: 1435 NSASIHMPRIGYQDGSDRSEWYTIERLLRKYASIYNINIYV 1475 >ref|XP_002326828.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222835143|gb|EEE73578.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 866 Score = 155 bits (391), Expect = 4e-36 Identities = 72/101 (71%), Positives = 90/101 (89%) Frame = +2 Query: 2 LHLIRLEDGCNEKNMDGNAPKMVALAVVQSYNPRRKVPRSEISLVHLESCLSKAAFSAAQ 181 +HL+++ + + +NM+G+ P+ VALAVVQSYNPRRKVPRSEIS+ LE+CLSKA+F+AAQ Sbjct: 766 VHLVKIIENTDGQNMEGDTPRWVALAVVQSYNPRRKVPRSEISIPDLEACLSKASFAAAQ 825 Query: 182 NSASIHMPRIGYQDGSDRSQWYTIERLLRKYASIYNINIFV 304 NSASIHMPRIGYQDG+DRSQWYT+ERLLRKYAS++ I I V Sbjct: 826 NSASIHMPRIGYQDGTDRSQWYTVERLLRKYASVFGIKIHV 866 >ref|XP_004166129.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 1-like [Cucumis sativus] Length = 867 Score = 150 bits (379), Expect = 1e-34 Identities = 74/101 (73%), Positives = 88/101 (87%) Frame = +2 Query: 2 LHLIRLEDGCNEKNMDGNAPKMVALAVVQSYNPRRKVPRSEISLVHLESCLSKAAFSAAQ 181 LHLI+L E++ NAP+ VALAVVQSYNPRRKVPRS+ISL LE+C+SKA+ SAA+ Sbjct: 760 LHLIKLGIISKEQSTSDNAPQWVALAVVQSYNPRRKVPRSKISLPDLENCISKASSSAAK 819 Query: 182 NSASIHMPRIGYQDGSDRSQWYTIERLLRKYASIYNINIFV 304 +SASIHMPRIGYQDGSDRS+WYT+ERLLRKYASIYN+ I+V Sbjct: 820 HSASIHMPRIGYQDGSDRSEWYTVERLLRKYASIYNVKIYV 860 >ref|XP_004140512.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Cucumis sativus] Length = 868 Score = 150 bits (379), Expect = 1e-34 Identities = 74/101 (73%), Positives = 88/101 (87%) Frame = +2 Query: 2 LHLIRLEDGCNEKNMDGNAPKMVALAVVQSYNPRRKVPRSEISLVHLESCLSKAAFSAAQ 181 LHLI+L E++ NAP+ VALAVVQSYNPRRKVPRS+ISL LE+C+SKA+ SAA+ Sbjct: 761 LHLIKLGIISKEQSTSDNAPQWVALAVVQSYNPRRKVPRSKISLPDLENCISKASSSAAK 820 Query: 182 NSASIHMPRIGYQDGSDRSQWYTIERLLRKYASIYNINIFV 304 +SASIHMPRIGYQDGSDRS+WYT+ERLLRKYASIYN+ I+V Sbjct: 821 HSASIHMPRIGYQDGSDRSEWYTVERLLRKYASIYNVKIYV 861 >ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Vitis vinifera] Length = 876 Score = 146 bits (369), Expect = 1e-33 Identities = 73/101 (72%), Positives = 83/101 (82%) Frame = +2 Query: 2 LHLIRLEDGCNEKNMDGNAPKMVALAVVQSYNPRRKVPRSEISLVHLESCLSKAAFSAAQ 181 LH I++ + C E+ MD NAP+ VALAVVQSYNPRRKVPRS IS+ LE CLSKA+F AAQ Sbjct: 772 LHFIKINEDCEEQRMDCNAPQWVALAVVQSYNPRRKVPRSNISVPDLECCLSKASFLAAQ 831 Query: 182 NSASIHMPRIGYQDGSDRSQWYTIERLLRKYASIYNINIFV 304 SASIHMPRIGYQ DRS+WYT+ERLLRKYAS+Y I IFV Sbjct: 832 KSASIHMPRIGYQ---DRSEWYTVERLLRKYASLYGIKIFV 869