BLASTX nr result

ID: Glycyrrhiza24_contig00032182 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032182
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629894.1| Pre-mRNA-processing factor [Medicago truncat...   187   8e-46
ref|XP_002271803.2| PREDICTED: uncharacterized protein LOC100243...   154   5e-36
emb|CBI30815.3| unnamed protein product [Vitis vinifera]              154   5e-36
emb|CAN77301.1| hypothetical protein VITISV_028745 [Vitis vinifera]   154   5e-36
ref|XP_002519747.1| Pre-mRNA-processing protein prp39, putative ...   148   4e-34

>ref|XP_003629894.1| Pre-mRNA-processing factor [Medicago truncatula]
           gi|355523916|gb|AET04370.1| Pre-mRNA-processing factor
           [Medicago truncatula]
          Length = 1215

 Score =  187 bits (475), Expect = 8e-46
 Identities = 87/93 (93%), Positives = 88/93 (94%)
 Frame = -1

Query: 279 LYSKISSFEAIIQRYYFDVRPLDANQLQNWHDYLDFIELQGDFDWAVKLYERCLIVCANY 100
           LYSKISSFEA IQRYYFD RPLDANQLQNWH YLDFIEL GDFDWAVKLYERCLIVCANY
Sbjct: 277 LYSKISSFEANIQRYYFDFRPLDANQLQNWHAYLDFIELHGDFDWAVKLYERCLIVCANY 336

Query: 99  PEYWMRYVDFMEAKGGREIANYSLDRATEIYLK 1
           P+YWMRY DFMEAKGGREIANYSLDRATEIYLK
Sbjct: 337 PDYWMRYADFMEAKGGREIANYSLDRATEIYLK 369


>ref|XP_002271803.2| PREDICTED: uncharacterized protein LOC100243465 [Vitis vinifera]
          Length = 1179

 Score =  154 bits (390), Expect = 5e-36
 Identities = 67/91 (73%), Positives = 81/91 (89%)
 Frame = -1

Query: 273 SKISSFEAIIQRYYFDVRPLDANQLQNWHDYLDFIELQGDFDWAVKLYERCLIVCANYPE 94
           +KI  FE  I+R YF V+PLD +QL+NWH YLDF+E+QGDFDWAVKLYERCLI CANYPE
Sbjct: 298 AKIHGFETHIRRPYFHVKPLDVSQLENWHQYLDFVEVQGDFDWAVKLYERCLIPCANYPE 357

Query: 93  YWMRYVDFMEAKGGREIANYSLDRATEIYLK 1
           +WMRYV+FME KGGREIAN++LDR+T+I+LK
Sbjct: 358 FWMRYVEFMEIKGGREIANFALDRSTKIFLK 388


>emb|CBI30815.3| unnamed protein product [Vitis vinifera]
          Length = 1195

 Score =  154 bits (390), Expect = 5e-36
 Identities = 67/91 (73%), Positives = 81/91 (89%)
 Frame = -1

Query: 273 SKISSFEAIIQRYYFDVRPLDANQLQNWHDYLDFIELQGDFDWAVKLYERCLIVCANYPE 94
           +KI  FE  I+R YF V+PLD +QL+NWH YLDF+E+QGDFDWAVKLYERCLI CANYPE
Sbjct: 253 AKIHGFETHIRRPYFHVKPLDVSQLENWHQYLDFVEVQGDFDWAVKLYERCLIPCANYPE 312

Query: 93  YWMRYVDFMEAKGGREIANYSLDRATEIYLK 1
           +WMRYV+FME KGGREIAN++LDR+T+I+LK
Sbjct: 313 FWMRYVEFMEIKGGREIANFALDRSTKIFLK 343


>emb|CAN77301.1| hypothetical protein VITISV_028745 [Vitis vinifera]
          Length = 559

 Score =  154 bits (390), Expect = 5e-36
 Identities = 67/91 (73%), Positives = 81/91 (89%)
 Frame = -1

Query: 273 SKISSFEAIIQRYYFDVRPLDANQLQNWHDYLDFIELQGDFDWAVKLYERCLIVCANYPE 94
           +KI  FE  I+R YF V+PLD +QL+NWH YLDF+E+QGDFDWAVKLYERCLI CANYPE
Sbjct: 61  AKIHGFETHIRRPYFHVKPLDVSQLENWHQYLDFVEVQGDFDWAVKLYERCLIPCANYPE 120

Query: 93  YWMRYVDFMEAKGGREIANYSLDRATEIYLK 1
           +WMRYV+FME KGGREIAN++LDR+T+I+LK
Sbjct: 121 FWMRYVEFMEIKGGREIANFALDRSTKIFLK 151


>ref|XP_002519747.1| Pre-mRNA-processing protein prp39, putative [Ricinus communis]
           gi|223541164|gb|EEF42720.1| Pre-mRNA-processing protein
           prp39, putative [Ricinus communis]
          Length = 395

 Score =  148 bits (374), Expect = 4e-34
 Identities = 68/93 (73%), Positives = 81/93 (87%)
 Frame = -1

Query: 279 LYSKISSFEAIIQRYYFDVRPLDANQLQNWHDYLDFIELQGDFDWAVKLYERCLIVCANY 100
           L  KIS FE  I+R YF V+PL+A+QL+NW+ YL+F EL GDFDWAVKLYERCLI CANY
Sbjct: 258 LNEKISYFETRIKRPYFHVKPLNASQLENWNCYLNFAELHGDFDWAVKLYERCLIPCANY 317

Query: 99  PEYWMRYVDFMEAKGGREIANYSLDRATEIYLK 1
           PE+WMRYV+FME+KGGREIAN +LDRAT+I+LK
Sbjct: 318 PEFWMRYVEFMESKGGREIANLALDRATQIFLK 350


Top