BLASTX nr result

ID: Glycyrrhiza24_contig00032181 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032181
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003617203.1| Proteasome-associated protein ECM29-like pro...    68   9e-10
ref|XP_003545430.1| PREDICTED: LOW QUALITY PROTEIN: proteasome-a...    58   9e-07
ref|XP_002526067.1| conserved hypothetical protein [Ricinus comm...    55   5e-06
ref|NP_850086.2| proteasome component ECM29 [Arabidopsis thalian...    55   8e-06

>ref|XP_003617203.1| Proteasome-associated protein ECM29-like protein [Medicago
           truncatula] gi|355518538|gb|AET00162.1|
           Proteasome-associated protein ECM29-like protein
           [Medicago truncatula]
          Length = 1976

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 40/68 (58%), Positives = 41/68 (60%)
 Frame = +1

Query: 79  MAESSSSTAAALGAKSDTEIEEMLDRMLTRLALCDDXXXXXXXXXXXXXXXXXXXXXXXX 258
           MAESSSSTA  L AKSD+EIEEMLDRMLTRLALCDD                        
Sbjct: 1   MAESSSSTATPLRAKSDSEIEEMLDRMLTRLALCDDSNLEPLLSKLLPLTISSLSSPSIA 60

Query: 259 VRNKVLEI 282
           VRNKVLEI
Sbjct: 61  VRNKVLEI 68


>ref|XP_003545430.1| PREDICTED: LOW QUALITY PROTEIN: proteasome-associated protein ECM29
           homolog [Glycine max]
          Length = 1814

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 36/68 (52%), Positives = 39/68 (57%)
 Frame = +1

Query: 79  MAESSSSTAAALGAKSDTEIEEMLDRMLTRLALCDDXXXXXXXXXXXXXXXXXXXXXXXX 258
           MAESSSS+ A    KSD+E+EEMLDRMLTRLALCDD                        
Sbjct: 1   MAESSSSSLA----KSDSEVEEMLDRMLTRLALCDDSKLEPLLSKLLPLCISSLSSQSVA 56

Query: 259 VRNKVLEI 282
           VRNKVLEI
Sbjct: 57  VRNKVLEI 64


>ref|XP_002526067.1| conserved hypothetical protein [Ricinus communis]
           gi|223534648|gb|EEF36344.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1011

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 35/68 (51%), Positives = 38/68 (55%)
 Frame = +1

Query: 79  MAESSSSTAAALGAKSDTEIEEMLDRMLTRLALCDDXXXXXXXXXXXXXXXXXXXXXXXX 258
           MA+SSSS+AA    KSD E EE+LDRMLTRLALCDD                        
Sbjct: 1   MADSSSSSAA----KSDVETEELLDRMLTRLALCDDSKLEALLSKLLPLTLSSLSSQSTA 56

Query: 259 VRNKVLEI 282
           VRNKVLEI
Sbjct: 57  VRNKVLEI 64


>ref|NP_850086.2| proteasome component ECM29 [Arabidopsis thaliana]
           gi|330252792|gb|AEC07886.1| proteasome component ECM29
           [Arabidopsis thaliana]
          Length = 1826

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/63 (49%), Positives = 37/63 (58%)
 Frame = +1

Query: 94  SSTAAALGAKSDTEIEEMLDRMLTRLALCDDXXXXXXXXXXXXXXXXXXXXXXXXVRNKV 273
           SS++++L +KSD E+EEMLDRMLTRLALCDD                        VRNKV
Sbjct: 4   SSSSSSLISKSDAELEEMLDRMLTRLALCDDSKLESLVSNLLPLTISSLSSQSPVVRNKV 63

Query: 274 LEI 282
           LEI
Sbjct: 64  LEI 66


Top