BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032177
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG12522.1|AC015446_3 Hypothetical Protein [Arabidopsis thali...   114   6e-24
ref|NP_174678.2| pentatricopeptide repeat-containing protein [Ar...   114   6e-24
ref|XP_002891080.1| pentatricopeptide repeat-containing protein ...   114   8e-24
ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   114   1e-23
ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containi...   114   1e-23

>gb|AAG12522.1|AC015446_3 Hypothetical Protein [Arabidopsis thaliana]
          Length = 539

 Score =  114 bits (286), Expect = 6e-24
 Identities = 59/104 (56%), Positives = 71/104 (68%), Gaps = 6/104 (5%)
 Frame = +1

Query: 1   QKCNSLIHMKQFQAHLITTGKFQFHPTRTRLLELFAISPAGDLSFAGKIFRRIQNPTTND 180
           QKC S   +KQ Q+H +T G FQ    R+RLLE  AISP GDLSFA +IFR I  P TND
Sbjct: 11  QKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPLTND 70

Query: 181 WNAVLRGLAGSSEPTQAISWYRTM------SRSAQKIDALTCSF 294
           WNA++RG AGSS P+ A SWYR+M      S +  ++DALTCSF
Sbjct: 71  WNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSF 114


>ref|NP_174678.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|193806500|sp|Q9FX24.2|PPR71_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g34160 gi|332193557|gb|AEE31678.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 581

 Score =  114 bits (286), Expect = 6e-24
 Identities = 59/104 (56%), Positives = 71/104 (68%), Gaps = 6/104 (5%)
 Frame = +1

Query: 1   QKCNSLIHMKQFQAHLITTGKFQFHPTRTRLLELFAISPAGDLSFAGKIFRRIQNPTTND 180
           QKC S   +KQ Q+H +T G FQ    R+RLLE  AISP GDLSFA +IFR I  P TND
Sbjct: 11  QKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPLTND 70

Query: 181 WNAVLRGLAGSSEPTQAISWYRTM------SRSAQKIDALTCSF 294
           WNA++RG AGSS P+ A SWYR+M      S +  ++DALTCSF
Sbjct: 71  WNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSF 114


>ref|XP_002891080.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297336922|gb|EFH67339.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 562

 Score =  114 bits (285), Expect = 8e-24
 Identities = 58/103 (56%), Positives = 70/103 (67%), Gaps = 5/103 (4%)
 Frame = +1

Query: 1   QKCNSLIHMKQFQAHLITTGKFQFHPTRTRLLELFAISPAGDLSFAGKIFRRIQNPTTND 180
           Q C +   +KQ Q+H +T G FQ    R+RLLE  AISP GDLSFA KIFR I  P TND
Sbjct: 11  QNCVTFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVKIFRHIPKPLTND 70

Query: 181 WNAVLRGLAGSSEPTQAISWYRTM-----SRSAQKIDALTCSF 294
           WNA++RG AGSS P+ A SWYR+M     S +  ++DALTCSF
Sbjct: 71  WNAIIRGFAGSSHPSLAFSWYRSMLQRSSSSALCRVDALTCSF 113


>ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g34160-like [Cucumis sativus]
          Length = 576

 Score =  114 bits (284), Expect = 1e-23
 Identities = 59/100 (59%), Positives = 70/100 (70%), Gaps = 2/100 (2%)
 Frame = +1

Query: 1   QKCNSLIHMKQFQAHLITTGKFQFHPTRTRLLELFAISPAGDLSFAGKIFRRIQNPTTND 180
           QKC+S   +KQ QA+LI  G F F  +RT+LLEL AIS  GDLS+A  IFR I  P+TND
Sbjct: 9   QKCSSFSQIKQLQANLIINGDFHFSSSRTKLLELCAISSFGDLSYALHIFRYIPYPSTND 68

Query: 181 WNAVLRGLAGSSEPTQAISWYRTM--SRSAQKIDALTCSF 294
           WNAV+RG A SS+P  A+ WYR M  S    +IDALTCSF
Sbjct: 69  WNAVIRGTALSSDPANAVFWYRAMAASNGLHRIDALTCSF 108


>ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g34160-like [Cucumis sativus]
          Length = 576

 Score =  114 bits (284), Expect = 1e-23
 Identities = 59/100 (59%), Positives = 70/100 (70%), Gaps = 2/100 (2%)
 Frame = +1

Query: 1   QKCNSLIHMKQFQAHLITTGKFQFHPTRTRLLELFAISPAGDLSFAGKIFRRIQNPTTND 180
           QKC+S   +KQ QA+LI  G F F  +RT+LLEL AIS  GDLS+A  IFR I  P+TND
Sbjct: 9   QKCSSFSQIKQLQANLIINGDFHFSSSRTKLLELCAISSFGDLSYALHIFRYIPYPSTND 68

Query: 181 WNAVLRGLAGSSEPTQAISWYRTM--SRSAQKIDALTCSF 294
           WNAV+RG A SS+P  A+ WYR M  S    +IDALTCSF
Sbjct: 69  WNAVIRGTALSSDPANAVFWYRAMAASNGLHRIDALTCSF 108