BLASTX nr result

ID: Glycyrrhiza24_contig00032174 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032174
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003603709.1| Rhamnogalacturonate lyase [Medicago truncatu...   172   3e-41
ref|XP_003526529.1| PREDICTED: probable rhamnogalacturonate lyas...   165   3e-39
ref|XP_003523772.1| PREDICTED: rhamnogalacturonate lyase B-like ...   163   1e-38
ref|XP_002527353.1| lyase, putative [Ricinus communis] gi|223533...   152   4e-35
ref|XP_002301112.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34

>ref|XP_003603709.1| Rhamnogalacturonate lyase [Medicago truncatula]
           gi|355492757|gb|AES73960.1| Rhamnogalacturonate lyase
           [Medicago truncatula]
          Length = 651

 Score =  172 bits (435), Expect = 3e-41
 Identities = 79/81 (97%), Positives = 80/81 (98%)
 Frame = -1

Query: 244 CMDPAVGFWLITPTNEFRSGGPVKQNLTSHVGPTTLAVFLSAHYSGEDLVPKFKAGEAWK 65
           CMDPAVGFWLITP+NEFRSGGPVKQNLTSHVGPTTLAVFLSAHYSGEDLVPKFKAGEAWK
Sbjct: 226 CMDPAVGFWLITPSNEFRSGGPVKQNLTSHVGPTTLAVFLSAHYSGEDLVPKFKAGEAWK 285

Query: 64  KVFGPVFIYVNSPYDGDDPIK 2
           KVFGPVFIYVNSPYDG DPIK
Sbjct: 286 KVFGPVFIYVNSPYDGSDPIK 306


>ref|XP_003526529.1| PREDICTED: probable rhamnogalacturonate lyase B-like [Glycine max]
          Length = 643

 Score =  165 bits (418), Expect = 3e-39
 Identities = 74/81 (91%), Positives = 79/81 (97%)
 Frame = -1

Query: 244 CMDPAVGFWLITPTNEFRSGGPVKQNLTSHVGPTTLAVFLSAHYSGEDLVPKFKAGEAWK 65
           CMDPAVGFWLITP+NEFRSGGP+KQNLTSHVGPTTLAVFLSAHYSGEDLVPKF +GEAWK
Sbjct: 223 CMDPAVGFWLITPSNEFRSGGPLKQNLTSHVGPTTLAVFLSAHYSGEDLVPKFNSGEAWK 282

Query: 64  KVFGPVFIYVNSPYDGDDPIK 2
           KVFGPVFIY+NSPYDG DP+K
Sbjct: 283 KVFGPVFIYLNSPYDGTDPLK 303


>ref|XP_003523772.1| PREDICTED: rhamnogalacturonate lyase B-like [Glycine max]
          Length = 643

 Score =  163 bits (413), Expect = 1e-38
 Identities = 74/81 (91%), Positives = 78/81 (96%)
 Frame = -1

Query: 244 CMDPAVGFWLITPTNEFRSGGPVKQNLTSHVGPTTLAVFLSAHYSGEDLVPKFKAGEAWK 65
           CMDPAVGFWLITP+NEFRSGGP+KQNLTSHVGPTTLAVFLSAHYSGEDLVPKF AGEAWK
Sbjct: 223 CMDPAVGFWLITPSNEFRSGGPLKQNLTSHVGPTTLAVFLSAHYSGEDLVPKFYAGEAWK 282

Query: 64  KVFGPVFIYVNSPYDGDDPIK 2
           KVFGPVFIY+NSPYDG  P+K
Sbjct: 283 KVFGPVFIYLNSPYDGSHPLK 303


>ref|XP_002527353.1| lyase, putative [Ricinus communis] gi|223533272|gb|EEF35025.1|
           lyase, putative [Ricinus communis]
          Length = 642

 Score =  152 bits (383), Expect = 4e-35
 Identities = 69/80 (86%), Positives = 75/80 (93%)
 Frame = -1

Query: 244 CMDPAVGFWLITPTNEFRSGGPVKQNLTSHVGPTTLAVFLSAHYSGEDLVPKFKAGEAWK 65
           CMDP+VGFW ITP+NEFRSGGPVKQNLTSHVGPTTL+VFLSAHYSGEDLVPKF AGEAWK
Sbjct: 223 CMDPSVGFWQITPSNEFRSGGPVKQNLTSHVGPTTLSVFLSAHYSGEDLVPKFVAGEAWK 282

Query: 64  KVFGPVFIYVNSPYDGDDPI 5
           KVFGPVF+Y+NS   GDDP+
Sbjct: 283 KVFGPVFMYLNSVLVGDDPL 302


>ref|XP_002301112.1| predicted protein [Populus trichocarpa] gi|222842838|gb|EEE80385.1|
           predicted protein [Populus trichocarpa]
          Length = 626

 Score =  150 bits (378), Expect = 1e-34
 Identities = 68/80 (85%), Positives = 73/80 (91%)
 Frame = -1

Query: 244 CMDPAVGFWLITPTNEFRSGGPVKQNLTSHVGPTTLAVFLSAHYSGEDLVPKFKAGEAWK 65
           CMDPAVGFW ITP++EFRSGGPVKQNLTSHVGPTTL +FLSAHYSGEDLVPK  AGEAWK
Sbjct: 204 CMDPAVGFWQITPSDEFRSGGPVKQNLTSHVGPTTLVMFLSAHYSGEDLVPKIGAGEAWK 263

Query: 64  KVFGPVFIYVNSPYDGDDPI 5
           KVFGPVF+Y NS  DGDDP+
Sbjct: 264 KVFGPVFMYFNSVMDGDDPL 283


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