BLASTX nr result

ID: Glycyrrhiza24_contig00032173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032173
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606390.1| DEAD-box ATP-dependent RNA helicase [Medicag...   194   5e-48
ref|XP_003547512.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...   187   8e-46
ref|XP_003533799.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...   186   1e-45
emb|CBI27769.3| unnamed protein product [Vitis vinifera]              182   2e-44
ref|XP_002277600.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   182   2e-44

>ref|XP_003606390.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355507445|gb|AES88587.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 613

 Score =  194 bits (494), Expect = 5e-48
 Identities = 95/111 (85%), Positives = 105/111 (94%), Gaps = 2/111 (1%)
 Frame = +1

Query: 64  DKESRGDNS--VFASCSFSSLGLHPTLCDQLRERLGFEVPTLVQAQAIPVILSGRHALVN 237
           D  ++GDN+  VFASCSFSSLGLH TLCDQLRER+GFE PTL+QAQAIPV+LSGRHALVN
Sbjct: 28  DGTNKGDNNNNVFASCSFSSLGLHQTLCDQLRERMGFEAPTLIQAQAIPVVLSGRHALVN 87

Query: 238 AATGTGKTVAYLAPIIHHLQSYDKRIQRSDGTYALVLVPTRELCLQVYEIL 390
           AATGTGKT+AYLAPIIHHLQSYDKR+QRSDGT+ALVLVPTRELCLQV+EIL
Sbjct: 88  AATGTGKTIAYLAPIIHHLQSYDKRVQRSDGTFALVLVPTRELCLQVHEIL 138


>ref|XP_003547512.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
           17-like [Glycine max]
          Length = 591

 Score =  187 bits (475), Expect = 8e-46
 Identities = 96/108 (88%), Positives = 99/108 (91%), Gaps = 1/108 (0%)
 Frame = +1

Query: 70  ESRGDNS-VFASCSFSSLGLHPTLCDQLRERLGFEVPTLVQAQAIPVILSGRHALVNAAT 246
           E  G NS VFASCSFSSLGL   LC+QLRERLGFEVPTLVQAQAIPVILSGRHALVNAAT
Sbjct: 13  EGNGTNSDVFASCSFSSLGLESNLCEQLRERLGFEVPTLVQAQAIPVILSGRHALVNAAT 72

Query: 247 GTGKTVAYLAPIIHHLQSYDKRIQRSDGTYALVLVPTRELCLQVYEIL 390
           GTGKTVAYLAPIIHHLQ Y+ RIQRSDGT+ALVLVPTRELCLQVYEIL
Sbjct: 73  GTGKTVAYLAPIIHHLQGYENRIQRSDGTFALVLVPTRELCLQVYEIL 120


>ref|XP_003533799.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
           17-like [Glycine max]
          Length = 596

 Score =  186 bits (473), Expect = 1e-45
 Identities = 93/109 (85%), Positives = 100/109 (91%)
 Frame = +1

Query: 64  DKESRGDNSVFASCSFSSLGLHPTLCDQLRERLGFEVPTLVQAQAIPVILSGRHALVNAA 243
           +K +  +N VFASCSFSSLGL   LC+QLR+RLGFEVPTLVQAQAIPVILSGRHALVNAA
Sbjct: 12  NKGNGANNDVFASCSFSSLGLDSNLCEQLRDRLGFEVPTLVQAQAIPVILSGRHALVNAA 71

Query: 244 TGTGKTVAYLAPIIHHLQSYDKRIQRSDGTYALVLVPTRELCLQVYEIL 390
           TGTGKTVAYLAPIIHHLQ Y+ RIQRSDGT+ALVLVPTRELCLQVYEIL
Sbjct: 72  TGTGKTVAYLAPIIHHLQGYENRIQRSDGTFALVLVPTRELCLQVYEIL 120


>emb|CBI27769.3| unnamed protein product [Vitis vinifera]
          Length = 584

 Score =  182 bits (462), Expect = 2e-44
 Identities = 85/104 (81%), Positives = 98/104 (94%)
 Frame = +1

Query: 79  GDNSVFASCSFSSLGLHPTLCDQLRERLGFEVPTLVQAQAIPVILSGRHALVNAATGTGK 258
           G++ +FASCSFSSLGLHPTLCDQLRER+GFEVPT+VQA+AIPVIL+GRH LVNAATGTGK
Sbjct: 22  GESEIFASCSFSSLGLHPTLCDQLRERMGFEVPTIVQAEAIPVILAGRHVLVNAATGTGK 81

Query: 259 TVAYLAPIIHHLQSYDKRIQRSDGTYALVLVPTRELCLQVYEIL 390
           T+AYLAP+I+HL  YD RI+RS GT+ALVLVPTRELC+QVYEIL
Sbjct: 82  TIAYLAPVINHLHKYDPRIERSAGTFALVLVPTRELCMQVYEIL 125


>ref|XP_002277600.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 17-like [Vitis
           vinifera]
          Length = 600

 Score =  182 bits (462), Expect = 2e-44
 Identities = 85/104 (81%), Positives = 98/104 (94%)
 Frame = +1

Query: 79  GDNSVFASCSFSSLGLHPTLCDQLRERLGFEVPTLVQAQAIPVILSGRHALVNAATGTGK 258
           G++ +FASCSFSSLGLHPTLCDQLRER+GFEVPT+VQA+AIPVIL+GRH LVNAATGTGK
Sbjct: 22  GESEIFASCSFSSLGLHPTLCDQLRERMGFEVPTIVQAEAIPVILAGRHVLVNAATGTGK 81

Query: 259 TVAYLAPIIHHLQSYDKRIQRSDGTYALVLVPTRELCLQVYEIL 390
           T+AYLAP+I+HL  YD RI+RS GT+ALVLVPTRELC+QVYEIL
Sbjct: 82  TIAYLAPVINHLHKYDPRIERSAGTFALVLVPTRELCMQVYEIL 125


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