BLASTX nr result

ID: Glycyrrhiza24_contig00032170 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032170
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528655.1| PREDICTED: pentatricopeptide repeat-containi...    99   4e-19
ref|XP_003609573.1| Pentatricopeptide repeat-containing protein ...    85   7e-15
ref|XP_002516850.1| pentatricopeptide repeat-containing protein,...    64   2e-08
ref|XP_002276935.1| PREDICTED: pentatricopeptide repeat-containi...    63   3e-08
emb|CBI26127.3| unnamed protein product [Vitis vinifera]               63   3e-08

>ref|XP_003528655.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36980,
           mitochondrial-like [Glycine max]
          Length = 629

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 48/56 (85%), Positives = 50/56 (89%)
 Frame = +2

Query: 2   KKVPGSSWIEIRNVVTAFVSGNNSYPYMADISKILYLLELEMRHTWPNNSDIEGSL 169
           KKVPGSSWIEIRN VT+FVSGNN+YPYMADISKILY LELEMRHT P N DIEG L
Sbjct: 574 KKVPGSSWIEIRNEVTSFVSGNNAYPYMADISKILYFLELEMRHTSPINFDIEGPL 629


>ref|XP_003609573.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355510628|gb|AES91770.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 665

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 41/45 (91%), Positives = 41/45 (91%)
 Frame = +2

Query: 2   KKVPGSSWIEIRNVVTAFVSGNNSYPYMADISKILYLLELEMRHT 136
           KKVPG SWIEIRNVVTAFVSGNN YP MADISKILY LELEMRHT
Sbjct: 573 KKVPGCSWIEIRNVVTAFVSGNNLYPCMADISKILYFLELEMRHT 617


>ref|XP_002516850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543938|gb|EEF45464.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 623

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 28/43 (65%), Positives = 34/43 (79%)
 Frame = +2

Query: 2   KKVPGSSWIEIRNVVTAFVSGNNSYPYMADISKILYLLELEMR 130
           KK+PG SWIE+RN VTAFV+GN+ YPY  ++ K LY LE EMR
Sbjct: 572 KKMPGCSWIEVRNKVTAFVAGNHLYPYTDELYKTLYFLEFEMR 614


>ref|XP_002276935.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36980,
           mitochondrial-like [Vitis vinifera]
          Length = 623

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 27/44 (61%), Positives = 36/44 (81%)
 Frame = +2

Query: 2   KKVPGSSWIEIRNVVTAFVSGNNSYPYMADISKILYLLELEMRH 133
           KK+PG SWIE+RN VT FV+GN+S+PYM ++ KIL  L+ EMR+
Sbjct: 572 KKMPGCSWIEVRNKVTVFVAGNHSHPYMEELCKILNFLKFEMRN 615


>emb|CBI26127.3| unnamed protein product [Vitis vinifera]
          Length = 603

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 27/44 (61%), Positives = 36/44 (81%)
 Frame = +2

Query: 2   KKVPGSSWIEIRNVVTAFVSGNNSYPYMADISKILYLLELEMRH 133
           KK+PG SWIE+RN VT FV+GN+S+PYM ++ KIL  L+ EMR+
Sbjct: 552 KKMPGCSWIEVRNKVTVFVAGNHSHPYMEELCKILNFLKFEMRN 595


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