BLASTX nr result
ID: Glycyrrhiza24_contig00032170
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00032170 (294 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003528655.1| PREDICTED: pentatricopeptide repeat-containi... 99 4e-19 ref|XP_003609573.1| Pentatricopeptide repeat-containing protein ... 85 7e-15 ref|XP_002516850.1| pentatricopeptide repeat-containing protein,... 64 2e-08 ref|XP_002276935.1| PREDICTED: pentatricopeptide repeat-containi... 63 3e-08 emb|CBI26127.3| unnamed protein product [Vitis vinifera] 63 3e-08 >ref|XP_003528655.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36980, mitochondrial-like [Glycine max] Length = 629 Score = 99.0 bits (245), Expect = 4e-19 Identities = 48/56 (85%), Positives = 50/56 (89%) Frame = +2 Query: 2 KKVPGSSWIEIRNVVTAFVSGNNSYPYMADISKILYLLELEMRHTWPNNSDIEGSL 169 KKVPGSSWIEIRN VT+FVSGNN+YPYMADISKILY LELEMRHT P N DIEG L Sbjct: 574 KKVPGSSWIEIRNEVTSFVSGNNAYPYMADISKILYFLELEMRHTSPINFDIEGPL 629 >ref|XP_003609573.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355510628|gb|AES91770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 665 Score = 84.7 bits (208), Expect = 7e-15 Identities = 41/45 (91%), Positives = 41/45 (91%) Frame = +2 Query: 2 KKVPGSSWIEIRNVVTAFVSGNNSYPYMADISKILYLLELEMRHT 136 KKVPG SWIEIRNVVTAFVSGNN YP MADISKILY LELEMRHT Sbjct: 573 KKVPGCSWIEIRNVVTAFVSGNNLYPCMADISKILYFLELEMRHT 617 >ref|XP_002516850.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223543938|gb|EEF45464.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 623 Score = 63.5 bits (153), Expect = 2e-08 Identities = 28/43 (65%), Positives = 34/43 (79%) Frame = +2 Query: 2 KKVPGSSWIEIRNVVTAFVSGNNSYPYMADISKILYLLELEMR 130 KK+PG SWIE+RN VTAFV+GN+ YPY ++ K LY LE EMR Sbjct: 572 KKMPGCSWIEVRNKVTAFVAGNHLYPYTDELYKTLYFLEFEMR 614 >ref|XP_002276935.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36980, mitochondrial-like [Vitis vinifera] Length = 623 Score = 62.8 bits (151), Expect = 3e-08 Identities = 27/44 (61%), Positives = 36/44 (81%) Frame = +2 Query: 2 KKVPGSSWIEIRNVVTAFVSGNNSYPYMADISKILYLLELEMRH 133 KK+PG SWIE+RN VT FV+GN+S+PYM ++ KIL L+ EMR+ Sbjct: 572 KKMPGCSWIEVRNKVTVFVAGNHSHPYMEELCKILNFLKFEMRN 615 >emb|CBI26127.3| unnamed protein product [Vitis vinifera] Length = 603 Score = 62.8 bits (151), Expect = 3e-08 Identities = 27/44 (61%), Positives = 36/44 (81%) Frame = +2 Query: 2 KKVPGSSWIEIRNVVTAFVSGNNSYPYMADISKILYLLELEMRH 133 KK+PG SWIE+RN VT FV+GN+S+PYM ++ KIL L+ EMR+ Sbjct: 552 KKMPGCSWIEVRNKVTVFVAGNHSHPYMEELCKILNFLKFEMRN 595