BLASTX nr result

ID: Glycyrrhiza24_contig00032157 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032157
         (574 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550930.1| PREDICTED: uncharacterized protein LOC100816...    57   3e-14
gb|ABI34329.1| Integrase core domain containing protein [Solanum...    74   2e-11
gb|ABI34342.1| Polyprotein, putative [Solanum demissum]                74   2e-11
emb|CAN69102.1| hypothetical protein VITISV_042048 [Vitis vinifera]    72   9e-11
ref|XP_003520384.1| PREDICTED: uncharacterized protein LOC100795...    71   1e-10

>ref|XP_003550930.1| PREDICTED: uncharacterized protein LOC100816049 [Glycine max]
          Length = 380

 Score = 56.6 bits (135), Expect(2) = 3e-14
 Identities = 27/45 (60%), Positives = 32/45 (71%)
 Frame = +2

Query: 134 CCSKNQNSCHIHVLKAHSSFVDKDSIFWRRPNAPFDQQSLEPPPS 268
           CCS+NQN CHIHVLKA+S+F DK         +P DQQSL+PP S
Sbjct: 79  CCSRNQNPCHIHVLKANSTFPDKAP---SSGASPLDQQSLDPPQS 120



 Score = 47.0 bits (110), Expect(2) = 3e-14
 Identities = 19/21 (90%), Positives = 20/21 (95%)
 Frame = +1

Query: 67  KSQRGHNKPNCKQCGNVSRSR 129
           KSQRGHNKP CKQCGNV+RSR
Sbjct: 50  KSQRGHNKPKCKQCGNVARSR 70


>gb|ABI34329.1| Integrase core domain containing protein [Solanum demissum]
          Length = 1775

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 52/108 (48%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
 Frame = +2

Query: 215  WRRPNAPFDQQSLEPPPSMLSLVFI--VEVGPDGQVDCLRA*KLVLWLKAIHRFLDL-IM 385
            WR+  A  D+ S         LV +  V++GPDGQVD L+A +LV   K   +   L   
Sbjct: 898  WRQ--AMVDEMSALHKSGTWELVSLPAVKIGPDGQVDRLKA-RLVA--KGYTQIFGLDYS 952

Query: 386  ENFLPVAEMTFV*PFLPMVDVNH*LLHQLDMKNAFQHGDLEEEVYMEQ 529
            + F PVA++  V  FL M  V H  LHQLD+KNAF HGDLEEEVYMEQ
Sbjct: 953  DTFAPVAKIASVRLFLSMAAVRHWPLHQLDIKNAFLHGDLEEEVYMEQ 1000


>gb|ABI34342.1| Polyprotein, putative [Solanum demissum]
          Length = 1054

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 51/108 (47%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
 Frame = +2

Query: 215 WRRPNAPFDQQSLEPPPSMLSLVFI--VEVGPDGQVDCLRA*KLVLWLKAIHRFLDL-IM 385
           WR+  A  D+ S         LV +  V++GPDGQVD L+A +LV   K   +   L   
Sbjct: 659 WRQ--AMVDEMSALHKSGTWELVSLPAVKIGPDGQVDRLKA-RLVA--KGYTQIFGLDYS 713

Query: 386 ENFLPVAEMTFV*PFLPMVDVNH*LLHQLDMKNAFQHGDLEEEVYMEQ 529
           + F PVA++  +  FL M  V H  LHQLD+KNAF HGDLEEEVYMEQ
Sbjct: 714 DTFAPVAKIASIRLFLSMAAVRHWPLHQLDIKNAFLHGDLEEEVYMEQ 761


>emb|CAN69102.1| hypothetical protein VITISV_042048 [Vitis vinifera]
          Length = 1135

 Score = 71.6 bits (174), Expect = 9e-11
 Identities = 46/103 (44%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
 Frame = +2

Query: 227  NAPFDQQSLEPPPSMLSL--VFIVEVGPDGQVDCLRA*KLVLWLKAIHRFLDLIMENFLP 400
            N  +D  SL P  S +    V+I++VGP+GQVD L+A  +V     I+       + F P
Sbjct: 720  NXTWDLVSLPPGKSTVGCRWVYIIKVGPBGQVDRLKARLVVKGYTQIYGCD--YGDTFSP 777

Query: 401  VAEMTFV*PFLPMVDVNH*LLHQLDMKNAFQHGDLEEEVYMEQ 529
            VA++ FV  FL M  + H  L+QLD+KN F HG+L EEVYMEQ
Sbjct: 778  VAKIAFVRLFLSMTTMCHWPLYQLDIKNVFXHGELFEEVYMEQ 820


>ref|XP_003520384.1| PREDICTED: uncharacterized protein LOC100795634 [Glycine max]
          Length = 1815

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 40/83 (48%), Positives = 56/83 (67%)
 Frame = +2

Query: 281  VFIVEVGPDGQVDCLRA*KLVLWLKAIHRFLDLIMENFLPVAEMTFV*PFLPMVDVNH*L 460
            V+ V+VGP+G+VD L+A  +      ++  +D   + F PVA++T V  FL M  + H  
Sbjct: 1050 VYTVKVGPNGKVDRLKARLVAKGYTQVYG-IDY-GDTFSPVAKLTTVRLFLAMAAIRHWP 1107

Query: 461  LHQLDMKNAFQHGDLEEEVYMEQ 529
            LHQLD+KNAF HGDLEE++YMEQ
Sbjct: 1108 LHQLDIKNAFLHGDLEEDIYMEQ 1130


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