BLASTX nr result

ID: Glycyrrhiza24_contig00032156 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032156
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548449.1| PREDICTED: TMV resistance protein N-like [Gl...   233   2e-59
gb|ABH07384.1| CMR1 [Phaseolus vulgaris]                              231   6e-59
ref|XP_003622506.1| TMV resistance protein N [Medicago truncatul...   208   3e-52
ref|XP_003624057.1| TMV resistance protein N [Medicago truncatul...   204   6e-51
ref|XP_003624006.1| TMV resistance protein N [Medicago truncatul...   201   4e-50

>ref|XP_003548449.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1289

 Score =  233 bits (593), Expect = 2e-59
 Identities = 114/135 (84%), Positives = 122/135 (90%), Gaps = 2/135 (1%)
 Frame = -3

Query: 401 MGRNIVFQESPNDPGKRSRLWAQKDIDQVLTKNKGTGEIQGIVLNLVQP--YEARWSTEA 228
           MGRNIVFQESPNDPGKRSRLW+QKDID VLTKNKGT EIQGIVLNLVQP  YE RWSTEA
Sbjct: 495 MGRNIVFQESPNDPGKRSRLWSQKDIDYVLTKNKGTDEIQGIVLNLVQPCDYEGRWSTEA 554

Query: 227 FSKTSQVRLLKLCDMNLPCGLNYLPSALKVLDWRGCPLKTLPLSNQLDEIVDLKLPHSKT 48
           FSKTSQ++LL LCDM LP GLN LPS+LKVL WRGCPLKTLPL+N+LDE+VDLKLPHS+ 
Sbjct: 555 FSKTSQLKLLMLCDMQLPRGLNCLPSSLKVLHWRGCPLKTLPLNNKLDEVVDLKLPHSRI 614

Query: 47  EQLWHGTKFLEKLKS 3
           EQLW GTK LEKLKS
Sbjct: 615 EQLWRGTKLLEKLKS 629


>gb|ABH07384.1| CMR1 [Phaseolus vulgaris]
          Length = 1133

 Score =  231 bits (588), Expect = 6e-59
 Identities = 112/134 (83%), Positives = 123/134 (91%), Gaps = 2/134 (1%)
 Frame = -3

Query: 401 MGRNIVFQESPNDPGKRSRLWAQKDIDQVLTKNKGTGEIQGIVLNLVQPY--EARWSTEA 228
           MGRNIV+QESPNDPGKRSRLW+QKDID VLTKNKGT EI+GIVLNLVQPY  EARW+TE+
Sbjct: 496 MGRNIVYQESPNDPGKRSRLWSQKDIDYVLTKNKGTDEIRGIVLNLVQPYDCEARWNTES 555

Query: 227 FSKTSQVRLLKLCDMNLPCGLNYLPSALKVLDWRGCPLKTLPLSNQLDEIVDLKLPHSKT 48
           FSK SQ+RLLKLCDM LP GLN LPSALKV+ WRGCPLKTLPLSNQLDE+VDLKLP+SK 
Sbjct: 556 FSKISQLRLLKLCDMQLPRGLNCLPSALKVVHWRGCPLKTLPLSNQLDEVVDLKLPYSKI 615

Query: 47  EQLWHGTKFLEKLK 6
           EQLWHGT+ LEKL+
Sbjct: 616 EQLWHGTELLEKLR 629


>ref|XP_003622506.1| TMV resistance protein N [Medicago truncatula]
           gi|355497521|gb|AES78724.1| TMV resistance protein N
           [Medicago truncatula]
          Length = 1137

 Score =  208 bits (530), Expect = 3e-52
 Identities = 98/133 (73%), Positives = 114/133 (85%)
 Frame = -3

Query: 401 MGRNIVFQESPNDPGKRSRLWAQKDIDQVLTKNKGTGEIQGIVLNLVQPYEARWSTEAFS 222
           MGRNIVF+ESPNDPGKRSRLW+QKD+DQVL +NKGT +IQGI ++LVQPYEA W  EAFS
Sbjct: 504 MGRNIVFEESPNDPGKRSRLWSQKDVDQVLRQNKGTDKIQGIAMDLVQPYEASWKIEAFS 563

Query: 221 KTSQVRLLKLCDMNLPCGLNYLPSALKVLDWRGCPLKTLPLSNQLDEIVDLKLPHSKTEQ 42
           K SQ+RLLKLC++ LP GLN  PS+L+VLDW GCPL+TLPL+N L EIV +KL  SK EQ
Sbjct: 564 KISQLRLLKLCEIKLPLGLNRFPSSLRVLDWSGCPLRTLPLTNHLVEIVAIKLYRSKIEQ 623

Query: 41  LWHGTKFLEKLKS 3
           LWHGT+FLE LKS
Sbjct: 624 LWHGTQFLENLKS 636


>ref|XP_003624057.1| TMV resistance protein N [Medicago truncatula]
           gi|355499072|gb|AES80275.1| TMV resistance protein N
           [Medicago truncatula]
          Length = 1122

 Score =  204 bits (519), Expect = 6e-51
 Identities = 96/132 (72%), Positives = 114/132 (86%)
 Frame = -3

Query: 401 MGRNIVFQESPNDPGKRSRLWAQKDIDQVLTKNKGTGEIQGIVLNLVQPYEARWSTEAFS 222
           MGRNIVFQESPNDPG+ SRLW+++DID VLTKNKGT +I  +VLNL+QPYEARWSTEAFS
Sbjct: 505 MGRNIVFQESPNDPGRCSRLWSKEDIDSVLTKNKGTEKISSVVLNLLQPYEARWSTEAFS 564

Query: 221 KTSQVRLLKLCDMNLPCGLNYLPSALKVLDWRGCPLKTLPLSNQLDEIVDLKLPHSKTEQ 42
           KTSQ++LL L ++ LP GL+ LP +LKVL WRGCPLKTL  +NQLDE+VD+KL HSK E+
Sbjct: 565 KTSQLKLLNLNEVQLPLGLSCLPCSLKVLRWRGCPLKTLAQTNQLDEVVDIKLSHSKIEK 624

Query: 41  LWHGTKFLEKLK 6
           LWHG  F+EKLK
Sbjct: 625 LWHGVYFMEKLK 636


>ref|XP_003624006.1| TMV resistance protein N [Medicago truncatula]
           gi|87162908|gb|ABD28703.1| TIR [Medicago truncatula]
           gi|355499021|gb|AES80224.1| TMV resistance protein N
           [Medicago truncatula]
          Length = 1134

 Score =  201 bits (512), Expect = 4e-50
 Identities = 93/132 (70%), Positives = 112/132 (84%)
 Frame = -3

Query: 401 MGRNIVFQESPNDPGKRSRLWAQKDIDQVLTKNKGTGEIQGIVLNLVQPYEARWSTEAFS 222
           MGR+IVFQESPNDP +RSRLW+Q+DID+VLTKNKGT  I  I + L+QPYEA W+TEAFS
Sbjct: 499 MGRDIVFQESPNDPCRRSRLWSQEDIDRVLTKNKGTEAINSIDMKLLQPYEAHWNTEAFS 558

Query: 221 KTSQVRLLKLCDMNLPCGLNYLPSALKVLDWRGCPLKTLPLSNQLDEIVDLKLPHSKTEQ 42
           KTSQ++ L LC+M LP GL+ LPS+LKVL WRGCPLKTLP++ QLDE+VD+ L HSK EQ
Sbjct: 559 KTSQLKFLSLCEMQLPLGLSCLPSSLKVLHWRGCPLKTLPITTQLDELVDITLSHSKIEQ 618

Query: 41  LWHGTKFLEKLK 6
           LW G KF+EK+K
Sbjct: 619 LWQGVKFMEKMK 630


Top