BLASTX nr result
ID: Glycyrrhiza24_contig00032139
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00032139
(278 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003547830.1| PREDICTED: protein BREVIS RADIX-like [Glycin... 168 5e-40
ref|XP_003547726.1| PREDICTED: protein BREVIS RADIX-like [Glycin... 165 3e-39
ref|XP_003517077.1| PREDICTED: protein BREVIS RADIX-like [Glycin... 154 7e-36
ref|XP_002303464.1| predicted protein [Populus trichocarpa] gi|2... 152 4e-35
ref|XP_004146121.1| PREDICTED: protein BREVIS RADIX-like [Cucumi... 151 6e-35
>ref|XP_003547830.1| PREDICTED: protein BREVIS RADIX-like [Glycine max]
Length = 349
Score = 168 bits (425), Expect = 5e-40
Identities = 78/96 (81%), Positives = 87/96 (90%), Gaps = 4/96 (4%)
Frame = +2
Query: 2 ADPRF----GGDRTPRGRDSASVCDVVLEDEDEPKEWVAQVEPGVHFHFVSLPNGGNDLR 169
+DPRF GGDRTPRGRDS+SVCDVVLEDEDEPKEW+AQVEPGVH FVSLPNGGNDL+
Sbjct: 106 SDPRFAGAYGGDRTPRGRDSSSVCDVVLEDEDEPKEWMAQVEPGVHITFVSLPNGGNDLK 165
Query: 170 RIRFNRDMFDRRQAQIWWGENYDRIRELYNVQRFNR 277
RIRF+R+MF++ QAQ WWGENYDRI ELYNVQRFN+
Sbjct: 166 RIRFSREMFNKWQAQRWWGENYDRIMELYNVQRFNK 201
Score = 58.2 bits (139), Expect = 7e-07
Identities = 29/76 (38%), Positives = 41/76 (53%)
Frame = +2
Query: 29 TPRGRDSASVCDVVLEDEDEPKEWVAQVEPGVHFHFVSLPNGGNDLRRIRFNRDMFDRRQ 208
T RD S+ + + EWV Q EPGV+ L +G +LRR+RF+R+ F
Sbjct: 277 TTASRDEPSISNA----SEMETEWVEQDEPGVYITIRQLADGTRELRRVRFSRERFGEVN 332
Query: 209 AQIWWGENYDRIRELY 256
A+ WW EN +RI+ Y
Sbjct: 333 AKTWWEENRERIQAQY 348
>ref|XP_003547726.1| PREDICTED: protein BREVIS RADIX-like [Glycine max]
Length = 349
Score = 165 bits (418), Expect = 3e-39
Identities = 77/96 (80%), Positives = 85/96 (88%), Gaps = 4/96 (4%)
Frame = +2
Query: 2 ADPRF----GGDRTPRGRDSASVCDVVLEDEDEPKEWVAQVEPGVHFHFVSLPNGGNDLR 169
+DPRF GGDRTPR RDS SVCDVVLEDEDEPKEW+AQVEPGVH FVSLPNGGNDL+
Sbjct: 106 SDPRFAGAFGGDRTPRARDSTSVCDVVLEDEDEPKEWMAQVEPGVHITFVSLPNGGNDLK 165
Query: 170 RIRFNRDMFDRRQAQIWWGENYDRIRELYNVQRFNR 277
RIRF+R+MF++ QAQ WWGENYDRI ELYNVQRFN+
Sbjct: 166 RIRFSREMFNKWQAQRWWGENYDRIMELYNVQRFNK 201
Score = 58.2 bits (139), Expect = 7e-07
Identities = 29/76 (38%), Positives = 41/76 (53%)
Frame = +2
Query: 29 TPRGRDSASVCDVVLEDEDEPKEWVAQVEPGVHFHFVSLPNGGNDLRRIRFNRDMFDRRQ 208
T RD S+ + + EWV Q EPGV+ L +G +LRR+RF+R+ F
Sbjct: 277 TTASRDEPSISNA----SEMETEWVEQDEPGVYITIRQLADGTRELRRVRFSRERFGEVN 332
Query: 209 AQIWWGENYDRIRELY 256
A+ WW EN +RI+ Y
Sbjct: 333 AKTWWEENRERIQAQY 348
>ref|XP_003517077.1| PREDICTED: protein BREVIS RADIX-like [Glycine max]
Length = 348
Score = 154 bits (389), Expect = 7e-36
Identities = 70/88 (79%), Positives = 77/88 (87%)
Frame = +2
Query: 14 FGGDRTPRGRDSASVCDVVLEDEDEPKEWVAQVEPGVHFHFVSLPNGGNDLRRIRFNRDM 193
F GDRTPRG SA CDVV+EDEDE KEW+AQVEPGVH FVSLPNGGNDL+RIRF+R++
Sbjct: 114 FSGDRTPRGPQSAPACDVVVEDEDETKEWMAQVEPGVHITFVSLPNGGNDLKRIRFSREI 173
Query: 194 FDRRQAQIWWGENYDRIRELYNVQRFNR 277
FD+ QAQ WWGENYDRI ELYNVQRFNR
Sbjct: 174 FDKWQAQKWWGENYDRIMELYNVQRFNR 201
Score = 56.6 bits (135), Expect = 2e-06
Identities = 28/76 (36%), Positives = 41/76 (53%)
Frame = +2
Query: 29 TPRGRDSASVCDVVLEDEDEPKEWVAQVEPGVHFHFVSLPNGGNDLRRIRFNRDMFDRRQ 208
T RD S+ + D EW+ Q EPGV+ L +G +LRR+RF+R+ F
Sbjct: 276 TTSSRDERSMSNA----SDLETEWIEQDEPGVYITIRQLADGTKELRRVRFSRERFGEGH 331
Query: 209 AQIWWGENYDRIRELY 256
A+ WW +N +RI+ Y
Sbjct: 332 AKKWWEDNRERIQAQY 347
>ref|XP_002303464.1| predicted protein [Populus trichocarpa] gi|222840896|gb|EEE78443.1|
predicted protein [Populus trichocarpa]
Length = 337
Score = 152 bits (383), Expect = 4e-35
Identities = 74/96 (77%), Positives = 81/96 (84%), Gaps = 4/96 (4%)
Frame = +2
Query: 2 ADPRF----GGDRTPRGRDSASVCDVVLEDEDEPKEWVAQVEPGVHFHFVSLPNGGNDLR 169
AD RF GGDRTP G +S CDVVLEDEDEPKEW+AQVEPGVH FVSLPNGGNDL+
Sbjct: 110 ADSRFSTLYGGDRTPGGAES---CDVVLEDEDEPKEWMAQVEPGVHITFVSLPNGGNDLK 166
Query: 170 RIRFNRDMFDRRQAQIWWGENYDRIRELYNVQRFNR 277
RIRF+R+MF++ QAQ WWGENYDRI ELYNVQRFNR
Sbjct: 167 RIRFSREMFNKWQAQRWWGENYDRITELYNVQRFNR 202
Score = 58.9 bits (141), Expect = 4e-07
Identities = 30/76 (39%), Positives = 41/76 (53%)
Frame = +2
Query: 29 TPRGRDSASVCDVVLEDEDEPKEWVAQVEPGVHFHFVSLPNGGNDLRRIRFNRDMFDRRQ 208
T RD S+ V D EWV Q EPGV+ L +G +LRR+RF+R+ F
Sbjct: 263 TTSSRDEPSIS--VSNASDLETEWVEQDEPGVYITIRQLADGTRELRRVRFSREQFGEVH 320
Query: 209 AQIWWGENYDRIRELY 256
A+ WW +N +RI+ Y
Sbjct: 321 AKTWWEQNRERIQAQY 336
>ref|XP_004146121.1| PREDICTED: protein BREVIS RADIX-like [Cucumis sativus]
gi|449520457|ref|XP_004167250.1| PREDICTED: protein
BREVIS RADIX-like [Cucumis sativus]
Length = 361
Score = 151 bits (381), Expect = 6e-35
Identities = 68/88 (77%), Positives = 77/88 (87%)
Frame = +2
Query: 14 FGGDRTPRGRDSASVCDVVLEDEDEPKEWVAQVEPGVHFHFVSLPNGGNDLRRIRFNRDM 193
+ GD+TP G + S CDVVLEDEDEPKEW+AQVEPGVH FVSLPNGGNDL+RIRFNR+M
Sbjct: 116 YRGDQTPGGDSTISACDVVLEDEDEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFNREM 175
Query: 194 FDRRQAQIWWGENYDRIRELYNVQRFNR 277
F++ QAQ WWGENYDRI ELYNVQRFN+
Sbjct: 176 FNKWQAQRWWGENYDRITELYNVQRFNQ 203
Score = 55.8 bits (133), Expect = 3e-06
Identities = 28/76 (36%), Positives = 40/76 (52%)
Frame = +2
Query: 29 TPRGRDSASVCDVVLEDEDEPKEWVAQVEPGVHFHFVSLPNGGNDLRRIRFNRDMFDRRQ 208
T RD S+ + D EWV + EPGV+ L +G +LRR+RF+R+ F
Sbjct: 287 TTSSRDEPSIS--ISNASDIEAEWVEEDEPGVYITIRQLVDGTRELRRVRFSRERFGEMN 344
Query: 209 AQIWWGENYDRIRELY 256
A+ WW N +RI+ Y
Sbjct: 345 AKQWWEHNRERIQAQY 360