BLASTX nr result

ID: Glycyrrhiza24_contig00032132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032132
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536886.1| PREDICTED: mismatch repair endonuclease PMS2...   130   1e-28
ref|XP_003520235.1| PREDICTED: mismatch repair endonuclease PMS2...   128   4e-28
ref|XP_003591551.1| DNA mismatch repair protein [Medicago trunca...   122   2e-26

>ref|XP_003536886.1| PREDICTED: mismatch repair endonuclease PMS2-like [Glycine max]
          Length = 944

 Score =  130 bits (326), Expect = 1e-28
 Identities = 64/91 (70%), Positives = 72/91 (79%)
 Frame = +3

Query: 3   ALREGFQQIYSPNNVCYSVNEIMEPDVKEDCVELCSSHRKSPIAMKPSSPNGSLPQEEHY 182
           ALREG QQIYS +NVCYSVNE++ P  KE CVELCSSH KSPI MK  SPNGS PQ+E  
Sbjct: 330 ALREGLQQIYSASNVCYSVNEVVLPAEKEACVELCSSHGKSPIVMKLLSPNGSRPQKEQC 389

Query: 183 TECNNGSISGDEHNTDHNNDSISHDEHKEKH 275
           +E NNGSIS DE N + NND+IS DEH+EKH
Sbjct: 390 SESNNGSISLDEINAECNNDTISQDEHEEKH 420


>ref|XP_003520235.1| PREDICTED: mismatch repair endonuclease PMS2-like [Glycine max]
          Length = 1036

 Score =  128 bits (322), Expect = 4e-28
 Identities = 62/91 (68%), Positives = 72/91 (79%)
 Frame = +3

Query: 3   ALREGFQQIYSPNNVCYSVNEIMEPDVKEDCVELCSSHRKSPIAMKPSSPNGSLPQEEHY 182
           ALREG QQIYS +NVCYSVNE+M P  KE+CVELCSSH KSPI  K  SPN S PQ+E  
Sbjct: 330 ALREGLQQIYSASNVCYSVNEVMLPAEKEECVELCSSHGKSPIVRKLYSPNASCPQKEQC 389

Query: 183 TECNNGSISGDEHNTDHNNDSISHDEHKEKH 275
           +E NNGS+S DE +T+ NND+IS DEH+EKH
Sbjct: 390 SESNNGSVSLDEIDTECNNDTISQDEHEEKH 420


>ref|XP_003591551.1| DNA mismatch repair protein [Medicago truncatula]
           gi|355480599|gb|AES61802.1| DNA mismatch repair protein
           [Medicago truncatula]
          Length = 933

 Score =  122 bits (307), Expect = 2e-26
 Identities = 59/91 (64%), Positives = 69/91 (75%)
 Frame = +3

Query: 3   ALREGFQQIYSPNNVCYSVNEIMEPDVKEDCVELCSSHRKSPIAMKPSSPNGSLPQEEHY 182
           ALREG QQIYSP+N  Y+VNE M P  KEDC EL SS +KSPI  KP+S N ++PQEEHY
Sbjct: 330 ALREGLQQIYSPDNASYAVNEFMRPAAKEDCFELRSSQKKSPIVTKPASLNVAIPQEEHY 389

Query: 183 TECNNGSISGDEHNTDHNNDSISHDEHKEKH 275
           TE N  SIS D++N+D N  SIS +EHKEKH
Sbjct: 390 TEFNTASISRDKNNSDRNGGSISLNEHKEKH 420


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