BLASTX nr result

ID: Glycyrrhiza24_contig00032083 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032083
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532392.1| PREDICTED: CCA-adding enzyme-like [Glycine max]   188   4e-46
ref|XP_003630568.1| Poly(A) polymerase [Medicago truncatula] gi|...   186   1e-45
ref|XP_003524478.1| PREDICTED: CCA-adding enzyme-like [Glycine max]   181   5e-44
ref|XP_003522448.1| PREDICTED: uncharacterized protein LOC100796...   170   1e-40
ref|XP_002266814.1| PREDICTED: CCA-adding enzyme [Vitis vinifera...   149   2e-34

>ref|XP_003532392.1| PREDICTED: CCA-adding enzyme-like [Glycine max]
          Length = 527

 Score =  188 bits (477), Expect = 4e-46
 Identities = 89/103 (86%), Positives = 94/103 (91%), Gaps = 1/103 (0%)
 Frame = -2

Query: 308 KDFDIITSADLKEVMRTFSWCEIVGKRFPICHVHMDGTIVEVSSFNTASARCKLGMHFAH 129
           KDFDIITSADLKEV +TFSWCEIVGKRFPICHVHMDGTIVEVSSFNT  ARCK  MHF +
Sbjct: 117 KDFDIITSADLKEVRKTFSWCEIVGKRFPICHVHMDGTIVEVSSFNT--ARCKSSMHFIY 174

Query: 128 -DIKAPNGCDKDDYLRWRNCLNRDFTINGLMFDPYAKIVYDYM 3
            DI+APN CDK+DYLRWRNCL RDFTINGLMFDPYA+IVYDYM
Sbjct: 175 DDIEAPNDCDKEDYLRWRNCLKRDFTINGLMFDPYARIVYDYM 217


>ref|XP_003630568.1| Poly(A) polymerase [Medicago truncatula]
           gi|355524590|gb|AET05044.1| Poly(A) polymerase [Medicago
           truncatula]
          Length = 543

 Score =  186 bits (473), Expect = 1e-45
 Identities = 87/102 (85%), Positives = 93/102 (91%)
 Frame = -2

Query: 308 KDFDIITSADLKEVMRTFSWCEIVGKRFPICHVHMDGTIVEVSSFNTASARCKLGMHFAH 129
           KDFDI+TSADLKEVMRTFSWCEIVGKRFPICHVHMDG IVEVSSFNT  A+ K G HFAH
Sbjct: 134 KDFDILTSADLKEVMRTFSWCEIVGKRFPICHVHMDGIIVEVSSFNT--AKRKPGRHFAH 191

Query: 128 DIKAPNGCDKDDYLRWRNCLNRDFTINGLMFDPYAKIVYDYM 3
           DI+AP G DK+DYLRWRNC+NRDFTING MFDP+AKIVYDYM
Sbjct: 192 DIEAPKGFDKEDYLRWRNCVNRDFTINGFMFDPFAKIVYDYM 233


>ref|XP_003524478.1| PREDICTED: CCA-adding enzyme-like [Glycine max]
          Length = 538

 Score =  181 bits (459), Expect = 5e-44
 Identities = 87/103 (84%), Positives = 93/103 (90%), Gaps = 1/103 (0%)
 Frame = -2

Query: 308 KDFDIITSADLKEVMRTFSWCEIVGKRFPICHVHMDGTIVEVSSFNTASARCKLGMHFAH 129
           KDFDIITSADLKEV +TFS CEIVGKRFPICHVHMDGTIVEVSSFNT  ARCK  MHF +
Sbjct: 117 KDFDIITSADLKEVRKTFSLCEIVGKRFPICHVHMDGTIVEVSSFNT--ARCKSSMHFIY 174

Query: 128 -DIKAPNGCDKDDYLRWRNCLNRDFTINGLMFDPYAKIVYDYM 3
            DI+AP+ CDK+DYLRWRNCL RDFTINGLMFDPYA+IVYDYM
Sbjct: 175 DDIEAPHDCDKEDYLRWRNCLRRDFTINGLMFDPYARIVYDYM 217


>ref|XP_003522448.1| PREDICTED: uncharacterized protein LOC100796540 [Glycine max]
          Length = 540

 Score =  170 bits (430), Expect = 1e-40
 Identities = 78/101 (77%), Positives = 87/101 (86%)
 Frame = -2

Query: 308 KDFDIITSADLKEVMRTFSWCEIVGKRFPICHVHMDGTIVEVSSFNTASARCKLGMHFAH 129
           KDFDIITSA+LKEV RTFSW EIVGKRFP+CHVHMD TIVEVSSF+T   +CK GM F+H
Sbjct: 119 KDFDIITSAELKEVTRTFSWSEIVGKRFPVCHVHMDDTIVEVSSFDTT--KCKAGMEFSH 176

Query: 128 DIKAPNGCDKDDYLRWRNCLNRDFTINGLMFDPYAKIVYDY 6
            I+AP+GC K D+LRW NCLNRDFTINGLM DPYA+I YDY
Sbjct: 177 HIEAPSGCGKKDHLRWMNCLNRDFTINGLMLDPYARIAYDY 217


>ref|XP_002266814.1| PREDICTED: CCA-adding enzyme [Vitis vinifera]
           gi|296088167|emb|CBI35659.3| unnamed protein product
           [Vitis vinifera]
          Length = 537

 Score =  149 bits (377), Expect = 2e-34
 Identities = 70/102 (68%), Positives = 81/102 (79%)
 Frame = -2

Query: 308 KDFDIITSADLKEVMRTFSWCEIVGKRFPICHVHMDGTIVEVSSFNTASARCKLGMHFAH 129
           KDFDIITSA+LKEV+R F  CE+VGKRFPICHVH++ TIVEVSSF+T+  R   G    +
Sbjct: 119 KDFDIITSAELKEVLRAFPRCEVVGKRFPICHVHVNDTIVEVSSFSTSGKR--TGRKLDY 176

Query: 128 DIKAPNGCDKDDYLRWRNCLNRDFTINGLMFDPYAKIVYDYM 3
            ++ P  CD  DY+RWRNCL RDFTINGLMFDPY KIVYDYM
Sbjct: 177 ILRRPPDCDDHDYIRWRNCLQRDFTINGLMFDPYTKIVYDYM 218


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