BLASTX nr result

ID: Glycyrrhiza24_contig00032077 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032077
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520681.1| PREDICTED: protein ROS1-like [Glycine max]        115   5e-24
ref|XP_003541444.1| PREDICTED: protein ROS1-like [Glycine max]         76   3e-12
ref|XP_003537037.1| PREDICTED: uncharacterized protein LOC100806...    71   8e-11
ref|XP_003597584.1| DEMETER-like protein [Medicago truncatula] g...    57   1e-06

>ref|XP_003520681.1| PREDICTED: protein ROS1-like [Glycine max]
          Length = 1764

 Score =  115 bits (287), Expect = 5e-24
 Identities = 53/75 (70%), Positives = 65/75 (86%), Gaps = 1/75 (1%)
 Frame = -2

Query: 226 KKSTPVSSVHSCTNEMQQHHKSVLEDHSLP-LHNSLDVACEEMWRNKHSVDTLTEQFRHL 50
           K+S PV+S +SCTNEMQQHHK VLE+HS+   HN+L VACE++W+N H+VDTLTEQF  L
Sbjct: 603 KRSIPVNSKYSCTNEMQQHHKVVLENHSISHSHNALGVACEDIWKNIHTVDTLTEQFERL 662

Query: 49  NIYRDARELVLHGQN 5
           NIYR+ARE+VLHGQN
Sbjct: 663 NIYREAREIVLHGQN 677


>ref|XP_003541444.1| PREDICTED: protein ROS1-like [Glycine max]
          Length = 1881

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 35/75 (46%), Positives = 47/75 (62%)
 Frame = -2

Query: 226 KKSTPVSSVHSCTNEMQQHHKSVLEDHSLPLHNSLDVACEEMWRNKHSVDTLTEQFRHLN 47
           KKS P SS HS TNEM Q+H   LE++ LP+    D+  E +W   +++D LT QFR LN
Sbjct: 715 KKSVPSSSAHSTTNEMLQNHNFTLENYPLPMGKPSDIVPEVLWNTMNNIDALTLQFRQLN 774

Query: 46  IYRDARELVLHGQNA 2
           +  + R+L  H QNA
Sbjct: 775 LNTEVRDLAFHEQNA 789


>ref|XP_003537037.1| PREDICTED: uncharacterized protein LOC100806794 [Glycine max]
          Length = 1903

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 34/75 (45%), Positives = 45/75 (60%)
 Frame = -2

Query: 226  KKSTPVSSVHSCTNEMQQHHKSVLEDHSLPLHNSLDVACEEMWRNKHSVDTLTEQFRHLN 47
            KKS   SS HS TNEM  HH   LE+  LP+    D+  E +W   +++D LT QFR LN
Sbjct: 793  KKSVLSSSAHSTTNEMLHHHNFTLENCPLPMGKPSDIVPEVLWNTMNNIDALTLQFRQLN 852

Query: 46   IYRDARELVLHGQNA 2
            +  +AR+L  H +NA
Sbjct: 853  LNAEARDLAFHEENA 867


>ref|XP_003597584.1| DEMETER-like protein [Medicago truncatula]
           gi|355486632|gb|AES67835.1| DEMETER-like protein
           [Medicago truncatula]
          Length = 219

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 24/33 (72%), Positives = 31/33 (93%)
 Frame = -2

Query: 100 WRNKHSVDTLTEQFRHLNIYRDARELVLHGQNA 2
           W+N H++DTLT+QFRHLNIYR+AR+LVL+ QNA
Sbjct: 108 WKNIHTMDTLTQQFRHLNIYREARKLVLYEQNA 140


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