BLASTX nr result

ID: Glycyrrhiza24_contig00032051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032051
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containi...   150   1e-34
ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250...   145   4e-33
emb|CBI36868.3| unnamed protein product [Vitis vinifera]              145   4e-33
gb|ACU28590.1| At3g62890-like protein [Arabidopsis lyrata subsp....   120   1e-25
ref|XP_002876693.1| predicted protein [Arabidopsis lyrata subsp....   119   3e-25

>ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g62890-like [Glycine max]
          Length = 1116

 Score =  150 bits (378), Expect = 1e-34
 Identities = 70/82 (85%), Positives = 76/82 (92%)
 Frame = -2

Query: 247 RAGLIEDAWGVVKSMPMEPDVMIWGALLSGARMHGDIETCEISVKKLIELDPKNSGAYVL 68
           RAG IEDAW VVKSMPMEPDVMIWGALL+GAR+HGD+ETCEI++ KL+ELDP NS AYVL
Sbjct: 345 RAGRIEDAWNVVKSMPMEPDVMIWGALLNGARIHGDVETCEIAITKLLELDPANSSAYVL 404

Query: 67  LSNVYAKLGRWGEVRHLRDLME 2
           LSNVYAKLGRW EVRHLRDLME
Sbjct: 405 LSNVYAKLGRWREVRHLRDLME 426


>ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
          Length = 1130

 Score =  145 bits (365), Expect = 4e-33
 Identities = 66/82 (80%), Positives = 77/82 (93%)
 Frame = -2

Query: 247 RAGLIEDAWGVVKSMPMEPDVMIWGALLSGARMHGDIETCEISVKKLIELDPKNSGAYVL 68
           RAG I++AW VVKSMPMEPDV++WGALLSG+RMHGDIETCE+++KKLIEL+P NSGAYVL
Sbjct: 349 RAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDIETCELALKKLIELEPTNSGAYVL 408

Query: 67  LSNVYAKLGRWGEVRHLRDLME 2
           LSNVYAK GRW +VRH+RDLME
Sbjct: 409 LSNVYAKRGRWEDVRHVRDLME 430


>emb|CBI36868.3| unnamed protein product [Vitis vinifera]
          Length = 541

 Score =  145 bits (365), Expect = 4e-33
 Identities = 66/82 (80%), Positives = 77/82 (93%)
 Frame = -2

Query: 247 RAGLIEDAWGVVKSMPMEPDVMIWGALLSGARMHGDIETCEISVKKLIELDPKNSGAYVL 68
           RAG I++AW VVKSMPMEPDV++WGALLSG+RMHGDIETCE+++KKLIEL+P NSGAYVL
Sbjct: 318 RAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDIETCELALKKLIELEPTNSGAYVL 377

Query: 67  LSNVYAKLGRWGEVRHLRDLME 2
           LSNVYAK GRW +VRH+RDLME
Sbjct: 378 LSNVYAKRGRWEDVRHVRDLME 399


>gb|ACU28590.1| At3g62890-like protein [Arabidopsis lyrata subsp. petraea]
          Length = 243

 Score =  120 bits (300), Expect = 1e-25
 Identities = 57/82 (69%), Positives = 70/82 (85%)
 Frame = -2

Query: 247 RAGLIEDAWGVVKSMPMEPDVMIWGALLSGARMHGDIETCEISVKKLIELDPKNSGAYVL 68
           R+GLI++A   + SMPMEPDV+IWG+LLSG+RM GDI+TCE ++K+LIELDP NSGAYVL
Sbjct: 160 RSGLIKEAXSFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVL 219

Query: 67  LSNVYAKLGRWGEVRHLRDLME 2
           LSNVYAK GRW EV+ +R  ME
Sbjct: 220 LSNVYAKTGRWIEVKRIRHEME 241


>ref|XP_002876693.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297322531|gb|EFH52952.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 572

 Score =  119 bits (298), Expect = 3e-25
 Identities = 57/82 (69%), Positives = 70/82 (85%)
 Frame = -2

Query: 247 RAGLIEDAWGVVKSMPMEPDVMIWGALLSGARMHGDIETCEISVKKLIELDPKNSGAYVL 68
           R+GLI++A   + SMPMEPDV+IWG+LLSG+RM GDI+TCE ++K+LIELDP NSGAYVL
Sbjct: 349 RSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVL 408

Query: 67  LSNVYAKLGRWGEVRHLRDLME 2
           LSNVYAK GRW EV+ +R  ME
Sbjct: 409 LSNVYAKTGRWIEVKRIRHEME 430


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