BLASTX nr result
ID: Glycyrrhiza24_contig00032051
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00032051 (248 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containi... 150 1e-34 ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250... 145 4e-33 emb|CBI36868.3| unnamed protein product [Vitis vinifera] 145 4e-33 gb|ACU28590.1| At3g62890-like protein [Arabidopsis lyrata subsp.... 120 1e-25 ref|XP_002876693.1| predicted protein [Arabidopsis lyrata subsp.... 119 3e-25 >ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62890-like [Glycine max] Length = 1116 Score = 150 bits (378), Expect = 1e-34 Identities = 70/82 (85%), Positives = 76/82 (92%) Frame = -2 Query: 247 RAGLIEDAWGVVKSMPMEPDVMIWGALLSGARMHGDIETCEISVKKLIELDPKNSGAYVL 68 RAG IEDAW VVKSMPMEPDVMIWGALL+GAR+HGD+ETCEI++ KL+ELDP NS AYVL Sbjct: 345 RAGRIEDAWNVVKSMPMEPDVMIWGALLNGARIHGDVETCEIAITKLLELDPANSSAYVL 404 Query: 67 LSNVYAKLGRWGEVRHLRDLME 2 LSNVYAKLGRW EVRHLRDLME Sbjct: 405 LSNVYAKLGRWREVRHLRDLME 426 >ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera] Length = 1130 Score = 145 bits (365), Expect = 4e-33 Identities = 66/82 (80%), Positives = 77/82 (93%) Frame = -2 Query: 247 RAGLIEDAWGVVKSMPMEPDVMIWGALLSGARMHGDIETCEISVKKLIELDPKNSGAYVL 68 RAG I++AW VVKSMPMEPDV++WGALLSG+RMHGDIETCE+++KKLIEL+P NSGAYVL Sbjct: 349 RAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDIETCELALKKLIELEPTNSGAYVL 408 Query: 67 LSNVYAKLGRWGEVRHLRDLME 2 LSNVYAK GRW +VRH+RDLME Sbjct: 409 LSNVYAKRGRWEDVRHVRDLME 430 >emb|CBI36868.3| unnamed protein product [Vitis vinifera] Length = 541 Score = 145 bits (365), Expect = 4e-33 Identities = 66/82 (80%), Positives = 77/82 (93%) Frame = -2 Query: 247 RAGLIEDAWGVVKSMPMEPDVMIWGALLSGARMHGDIETCEISVKKLIELDPKNSGAYVL 68 RAG I++AW VVKSMPMEPDV++WGALLSG+RMHGDIETCE+++KKLIEL+P NSGAYVL Sbjct: 318 RAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDIETCELALKKLIELEPTNSGAYVL 377 Query: 67 LSNVYAKLGRWGEVRHLRDLME 2 LSNVYAK GRW +VRH+RDLME Sbjct: 378 LSNVYAKRGRWEDVRHVRDLME 399 >gb|ACU28590.1| At3g62890-like protein [Arabidopsis lyrata subsp. petraea] Length = 243 Score = 120 bits (300), Expect = 1e-25 Identities = 57/82 (69%), Positives = 70/82 (85%) Frame = -2 Query: 247 RAGLIEDAWGVVKSMPMEPDVMIWGALLSGARMHGDIETCEISVKKLIELDPKNSGAYVL 68 R+GLI++A + SMPMEPDV+IWG+LLSG+RM GDI+TCE ++K+LIELDP NSGAYVL Sbjct: 160 RSGLIKEAXSFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVL 219 Query: 67 LSNVYAKLGRWGEVRHLRDLME 2 LSNVYAK GRW EV+ +R ME Sbjct: 220 LSNVYAKTGRWIEVKRIRHEME 241 >ref|XP_002876693.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297322531|gb|EFH52952.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 572 Score = 119 bits (298), Expect = 3e-25 Identities = 57/82 (69%), Positives = 70/82 (85%) Frame = -2 Query: 247 RAGLIEDAWGVVKSMPMEPDVMIWGALLSGARMHGDIETCEISVKKLIELDPKNSGAYVL 68 R+GLI++A + SMPMEPDV+IWG+LLSG+RM GDI+TCE ++K+LIELDP NSGAYVL Sbjct: 349 RSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVL 408 Query: 67 LSNVYAKLGRWGEVRHLRDLME 2 LSNVYAK GRW EV+ +R ME Sbjct: 409 LSNVYAKTGRWIEVKRIRHEME 430