BLASTX nr result

ID: Glycyrrhiza24_contig00032027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00032027
         (219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003604446.1| hypothetical protein MTR_4g012450 [Medicago ...   104   7e-21
ref|XP_003531681.1| PREDICTED: uncharacterized protein LOC100815...    68   9e-10
ref|NP_001077704.1| late embryogenesis abundant hydroxyproline-r...    63   2e-08
ref|NP_175643.1| late embryogenesis abundant hydroxyproline-rich...    63   2e-08
ref|XP_002891688.1| hypothetical protein ARALYDRAFT_474353 [Arab...    62   6e-08

>ref|XP_003604446.1| hypothetical protein MTR_4g012450 [Medicago truncatula]
           gi|355505501|gb|AES86643.1| hypothetical protein
           MTR_4g012450 [Medicago truncatula]
          Length = 197

 Score =  104 bits (260), Expect = 7e-21
 Identities = 47/73 (64%), Positives = 55/73 (75%)
 Frame = -1

Query: 219 RGFKLGHVESKGWHVRGWGSTRVFGDLESNGLPSADVAHLIHDLAKGRVHFHALAKVTGH 40
           RG KLGHVE++GWHV+GWGS  VFG+LE  GLPS DVAHL+ DLAK RVHFH    V G+
Sbjct: 94  RGHKLGHVETRGWHVKGWGSEHVFGELEFGGLPSPDVAHLMQDLAKKRVHFHTAVGVVGN 153

Query: 39  LGLLFYDFRRTFK 1
           LGL  + F + FK
Sbjct: 154 LGLFAFHFPKIFK 166


>ref|XP_003531681.1| PREDICTED: uncharacterized protein LOC100815479 [Glycine max]
          Length = 189

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 28/63 (44%), Positives = 44/63 (69%)
 Frame = -1

Query: 210 KLGHVESKGWHVRGWGSTRVFGDLESNGLPSADVAHLIHDLAKGRVHFHALAKVTGHLGL 31
           K+GHVE KGW V+GW ST V  ++    LPS+ V +L+ D+AKG+V+F  + +++G  G+
Sbjct: 93  KMGHVELKGWQVKGWSSTHVEAEVVFAELPSSQVPYLLEDVAKGKVYFRTVVELSGQFGI 152

Query: 30  LFY 22
           L +
Sbjct: 153 LSF 155


>ref|NP_001077704.1| late embryogenesis abundant hydroxyproline-rich glycoprotein
           [Arabidopsis thaliana] gi|60547641|gb|AAX23784.1|
           hypothetical protein At1g52330 [Arabidopsis thaliana]
           gi|71905459|gb|AAZ52707.1| expressed protein
           [Arabidopsis thaliana] gi|332194667|gb|AEE32788.1| late
           embryogenesis abundant hydroxyproline-rich glycoprotein
           [Arabidopsis thaliana]
          Length = 227

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
 Frame = -1

Query: 219 RGFKLGHVESKGWHVRGWGSTRVFGDLESNG-LPSADVAHLIHDLAKGRVHFHALAKVTG 43
           RG  LGHV S G HV  +GS+ +  + E +G +   DV HLIHDLAKG V F  + +  G
Sbjct: 119 RGKTLGHVSSDGGHVTAFGSSYLDAEAELDGVMVFPDVIHLIHDLAKGSVEFDTVTETNG 178

Query: 42  HLGLLFYDF 16
            LG+LF+ F
Sbjct: 179 KLGVLFFRF 187


>ref|NP_175643.1| late embryogenesis abundant hydroxyproline-rich glycoprotein
           [Arabidopsis thaliana]
           gi|12323119|gb|AAG51539.1|AC037424_4 hypothetical
           protein; 44111-43310 [Arabidopsis thaliana]
           gi|71905457|gb|AAZ52706.1| expressed protein
           [Arabidopsis thaliana] gi|332194666|gb|AEE32787.1| late
           embryogenesis abundant hydroxyproline-rich glycoprotein
           [Arabidopsis thaliana]
          Length = 214

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
 Frame = -1

Query: 219 RGFKLGHVESKGWHVRGWGSTRVFGDLESNG-LPSADVAHLIHDLAKGRVHFHALAKVTG 43
           RG  LGHV S G HV  +GS+ +  + E +G +   DV HLIHDLAKG V F  + +  G
Sbjct: 119 RGKTLGHVSSDGGHVTAFGSSYLDAEAELDGVMVFPDVIHLIHDLAKGSVEFDTVTETNG 178

Query: 42  HLGLLFYDF 16
            LG+LF+ F
Sbjct: 179 KLGVLFFRF 187


>ref|XP_002891688.1| hypothetical protein ARALYDRAFT_474353 [Arabidopsis lyrata subsp.
           lyrata] gi|297337530|gb|EFH67947.1| hypothetical protein
           ARALYDRAFT_474353 [Arabidopsis lyrata subsp. lyrata]
          Length = 214

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
 Frame = -1

Query: 219 RGFKLGHVESKGWHVRGWGSTRVFGDLESNGLPS-ADVAHLIHDLAKGRVHFHALAKVTG 43
           RG  LGHV S G HV  +GS+ +  + E +G+    DV HLIHDLAKG V F  + +  G
Sbjct: 119 RGKTLGHVSSDGGHVTAFGSSYLDAEAELDGVTVFPDVIHLIHDLAKGSVEFDTVTETNG 178

Query: 42  HLGLLFYDF 16
           +LG+ F+ F
Sbjct: 179 NLGVWFFRF 187


Top